Sphingomonas sp. KC8: KC8_12565
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Entry
KC8_12565 CDS
T04987
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03030
DNA replication
spkc03430
Mismatch repair
spkc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KC8_12565
03430 Mismatch repair
KC8_12565
03440 Homologous recombination
KC8_12565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spkc03032
]
KC8_12565
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_12565
Enzymes [BR:
spkc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KC8_12565
DNA replication proteins [BR:
spkc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KC8_12565
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KC8_12565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ARS28106
UniProt:
A0A1X9YGZ4
LinkDB
All DBs
Position
2633167..2634195
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AA seq
342 aa
AA seq
DB search
MKANLRQIEQALDRADPAIRFYLLHGPDESASRALARRIAKPLGTDAEKVELAGGTLKAD
PALLADEAAAIALFGGPRYILIDPAGDEILDAVDALLALPQAGNPVIAVAGTLRKDAKLL
KLATASDAAMAFASYAPEGRDADRLAITLGRDHGLSLTPDVARRLAAAAGNDRAVLDQEL
AKFAAYLDTGDDRPRELGHDALDALGADSEEGDLGKLVDAALSGDIAAADAELARLLSIG
TDAIPIVRTFQRQLLLLAQLRGEVAEGQSIDAVMAGPAGRAVFWKDKDKMARLIARWTPQ
AIATALGRMAEAGRLVMRSGGPGAIVVETEILALARAAHRMR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaacctccggcagatcgaacaggcgctcgaccgcgccgatccagccatccgt
ttctatctactgcatggtcccgatgaatcggcctcgcgcgcgctggccagacggatcgcc
aaaccgctggggaccgacgccgaaaaggtggagctggccggcggcacgctcaaggccgac
ccggccttgctggccgacgaagcggcggcaatcgccctgttcggcggtccgcgctacatt
ctgatcgatccggcgggcgacgagatactcgacgcggtggacgcgctgctggcgctgccc
caggccggcaacccagtgatcgcggtggcaggcacattgcgcaaggatgccaagctgctc
aagctggcaacggcaagcgacgcggcaatggccttcgccagctatgccccggaagggcgc
gacgccgatcgcctcgcgatcaccctcggccgtgatcatggcctgtcgcttacccccgat
gtcgcccgccggctggcagcggccgcgggcaatgatcgcgcggtgctcgatcaggaactt
gccaagtttgcggcctatctggacactggcgacgatcgcccccgcgaactgggccacgac
gcgctcgacgcgctgggcgccgacagcgaggaaggcgatctgggcaagctggtcgacgca
gcgttgagcggcgatatcgccgccgccgatgccgaactggcccggctgctcagcatcggc
accgacgcgataccgatcgtccgaaccttccagcgccaactgctgctgctcgcccagttg
cgcggtgaagtggccgaaggccagtcgatcgacgcggtgatggccgggcccgccgggcgc
gccgtgttctggaaagacaaggacaagatggcccggctgatcgcccgctggaccccacag
gccatcgccaccgcgctcgggcggatggcggaggccggacggctggtgatgcgttccggc
gggccaggcgccatcgtcgtggaaaccgaaatcctggcactcgcccgcgccgcccaccgg
atgcgctga
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