Sphingomonas sp. KC8: KC8_12825
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Entry
KC8_12825 CDS
T04987
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_12825
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_12825
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ARS28158
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All DBs
Position
complement(2684147..2686156)
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AA seq
669 aa
AA seq
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MRHLILTAALLAPTPAFADAGDIIVTGTGLAAPAGLAAYDVAVIDRDRLTTSASGRLEDV
LRDVAGFQQFRRSDSRSAHPTSQGATLRGLGGNASARALILLDGVPQTDPFGGWIPWAAY
DPARLGLVRVTRGGGSGVSGPGALAGTIELMSAGPGEIAPVWGGIAYGSRNSVDAEAGVS
GALGQGYGMLSASYARGDGFTPIAAEDRGPVDRPAFYEQASLSARTAFAIDDTTELQANL
LGMVDRRDRGVNFTPNRNLGADASIRLVGRGHWGWEAAAWAQLREFSSGFASVAPGRTSV
SPSLDQYAVPATGLGARFEIRPPLGDTIELRIGGDARQTDGKTKEFVYSTSRLRDAGGRT
RTLGAFAEASLTPSDALTLTAGARIDRWQIENGHLFEQSTITGVIANNTRFTDRSGWEPT
ARGGIAFRPAQAITLRSAAYLGWRLPSLNELYRPFRVGADSTIANALLNPERLKGVDAGV
DYRPLPGFRLSATAFYNQLDDAIANVTLAPNSRQRQNLDAIRSQGIELEAEARHGAWRLS
GSWTLIDARVRASGPQAGALDGLRPAQTPRHQASATLAYSRPESASASITVRHLAGQFED
DQNIRRLNAATTVDAAVQWPVARGFSIEARAENLANTLVETGISGAPGAEIIERATPRTL
WIGLRYSGR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcgccatctgatcctgaccgccgccctgctcgcccccaccccggccttcgccgatgcg
ggcgacatcatcgtcaccggcaccggccttgcagcgcccgccgggctggccgcgtatgac
gtcgcggtgatcgatcgcgaccggctgaccacatcggccagcggccggctggaagatgtg
ctgcgcgatgtggcggggttccagcagttccgccggtccgattcccggtccgcccacccg
accagccagggtgcaaccttgcggggcctgggcggcaacgcatcggcgcgcgcgctgatc
ctgctcgatggcgtgccgcaaaccgatcccttcggcgggtggattccctgggcggcctat
gatccggcacggctggggctggtgcgggttacgcgcggcggcggcagcggggtcagcggc
cccggcgcactggccggtacgatcgaactgatgagcgcaggtcccggcgagatcgccccc
gtctggggcgggatcgcttatggcagccgcaacagcgtggatgccgaagcgggggtcagc
ggcgcactcggtcaaggctatgggatgctatcggcatcctatgcccgcggcgacggcttc
accccgattgcggccgaagatcgcggcccggtcgatcgcccggccttctatgaacaggcc
agcctgtccgcccgcaccgcctttgccatcgacgacaccaccgaattgcaggccaatctg
ctcggcatggtcgatcgccgcgatcggggcgtgaatttcacccccaaccgcaatcttggc
gcggacgccagcatccggctggtcggccgcggccattggggctgggaagccgcggcctgg
gcacaattgcgcgaattttccagcgggttcgccagtgtcgcacccggccgcaccagcgtc
agccccagcctcgatcaatatgccgtccccgccaccgggcttggcgcgcgctttgaaatc
cgcccgcccttgggcgacacgatcgaactgcgcattggcggcgatgcccgccagaccgac
ggcaagaccaaggagttcgtctattccaccagccggctgcgcgatgccggcggacgcacc
cgcacgctcggcgcctttgccgaagccagcctcaccccgagcgacgcgctgacgctgacg
gcgggcgcgcggatcgatcgctggcagatcgaaaatggccatctgttcgaacagtccacc
atcaccggcgtgatcgcgaacaacacccgcttcaccgatcgatcgggctgggaacccacc
gcacgcggcggcattgcgttcaggccagcacaggcgatcaccctgcgcagcgcggcctat
ctcggctggcggctgcccagcctgaacgaactctatcgcccgttccgggttggcgcggat
tcgaccatcgccaatgcgctgctcaatcccgaacggctgaagggtgttgatgccggagtg
gattatcgcccgttgccgggcttccgcctgtcggccaccgctttctataaccagctcgac
gacgcgatcgccaacgtcaccctcgcccccaattcacgccagcgacagaatctcgatgcg
atccgctcgcaggggatcgaactggaggccgaagcgcggcatggcgcatggcggctttcg
ggatcatggaccctgatcgacgcgcgggtgcgcgcatccggcccgcaggccggcgcgctc
gatggcctgcgtccggcgcagacgccgcgccatcaggcgagcgcgacgctcgcctatagc
cgcccggaaagcgcatccgcctcgatcaccgtccgccatctcgccggccagttcgaagac
gaccagaatatccgccggctgaacgcggccaccacggtcgatgccgcggtccagtggcca
gtcgcccgtggcttttcgatcgaggcgcgcgcggaaaacctcgccaacacgctcgttgaa
acggggatttccggcgcgccgggtgccgaaatcatcgaacgggcaacgccgcgcacgctg
tggatcgggttgcgctacagcggccgctga
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