Sphingomonas sp. KC8: KC8_13020
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Entry
KC8_13020 CDS
T04987
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc00300
Lysine biosynthesis
spkc00470
D-Amino acid metabolism
spkc01100
Metabolic pathways
spkc01110
Biosynthesis of secondary metabolites
spkc01120
Microbial metabolism in diverse environments
spkc01230
Biosynthesis of amino acids
Module
spkc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KC8_13020
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KC8_13020
Enzymes [BR:
spkc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KC8_13020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ARS28197
UniProt:
A0A1X9YHH3
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All DBs
Position
2730279..2731553
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AA seq
424 aa
AA seq
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MDHFQIRDGVMHAEDVPLTLIAEAAGTPVYVYSTATILRHVRVLREALEGVESGPDGPLI
AYAVKANPNAAVLATLARAGLGADVVSGGELLRAIHAGVDPAKIVFSGVGKTADEMALAL
RHGIGQFNIESEPEAEMLSEVAVALGVIAPIAFRINPDVDAGTHAKISTGKSDNKFGVAY
HRASAAYARARDLPGLKVQGVAVHIGSQLTDLAPLEAAFNKIGALIATLRGEGHVITTAD
LGGGLGVPYDPAQPVPPSPAEYGVMVGRATKGWDVRLMFEPGRLIVANAGALISRVIRVK
DGADKPFVIVDAAMNDLMRPALYDAWHDIRTIVPRSQRFAANVVGPVCESGDTFAMNRTM
DAVEAGDLVGFMTAGAYGATMASTYNSRPLTAEVMVDGKDWAVVRERLPVEALIAADSLP
PWLK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttccagatccgcgacggcgtgatgcacgccgaggacgttccgctgaccctg
atcgcggaagccgccggtacgcccgtctacgtctattcgacggcgacgatcctgcgccat
gtgcgcgtcctgcgcgaggcgctggagggggtggagtccggccccgatggcccgctgatc
gcctatgcggtgaaggccaaccccaatgcggccgtgctggcgacgctggcgcgcgcgggg
ctgggcgctgacgtggtttcgggcggtgaattgctgcgcgcgatccacgccggggtcgat
ccggccaagatcgtcttttcgggcgtcggcaagacggcggatgaaatggcgctcgcgctg
cgccacggcatcggccagttcaacatcgaatccgaacccgaagccgaaatgctgtcggaa
gtggccgtggcgctgggcgtgatcgcgccgatcgcgttccgcatcaaccccgatgtcgat
gccggcacccatgccaagatttcgaccggcaagtccgacaacaagtttggcgtcgcctat
caccgggccagcgctgcttatgcccgcgcgcgcgatctgcccggcctgaaggtgcagggc
gtggccgtccatatcggcagccagttgaccgatctggcgccgctggaggccgcgttcaac
aagatcggcgcgctgatcgccaccttgcgcggcgaaggccatgtgatcaccaccgccgat
ctgggcggcgggcttggcgtgccttatgatccggcccagccggttccgcccagcccggcc
gaatatggcgtgatggtcggccgcgcgacgaagggttgggacgttcgcctgatgttcgaa
cccggccggctgatcgtcgccaatgccggtgcgctgatcagccgggtgatccgtgtgaag
gacggcgcggacaagcctttcgtcatcgtcgatgcggcgatgaacgatctgatgcggccg
gcattgtacgacgcgtggcacgatattcgcacgatcgtcccgcgttcccaacgatttgcc
gcgaatgttgtcggcccggtctgtgagagcggcgataccttcgccatgaaccggacgatg
gacgccgtcgaggcgggggatctggtcggtttcatgaccgccggggcctatggcgcgacg
atggccagcacgtacaacagccgtcccttgacggccgaagttatggtggatggtaaggat
tgggccgtagtgcgcgaacggttgccggtggaggcgctgatcgcagcggacagcctgccg
ccatggctgaaatag
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