Sphingomonas sp. KC8: KC8_13455
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Entry
KC8_13455 CDS
T04987
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spkc03036
]
KC8_13455
Chromosome and associated proteins [BR:
spkc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
KC8_13455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ARS28284
LinkDB
All DBs
Position
2827217..2831440
Genome browser
AA seq
1407 aa
AA seq
DB search
MSNLFDTAAQADREAVRLLLPHLQSGDPVHRRVLNQAMSAAFGGSDADGHWTQRDSFELL
EHALSIHLQASGSILSGMADIRPLIALSERLPTQTVRSENQIEWQQFSTPIDIAGILTLL
ADVQPEDVILEPSAGNGLLVAQLPTHKALHLNELDPLRRGRLHAAFPSAIVTGHDGATIN
STLASFDRPTLILMNPPFSRSIGRGADDYAAVRHLQAALRRLVPGGRLVAIMPDWFGPGA
RMRDQYETVLRDVTVRSAIRLEKCYQKHGTSIAVRIFVIDKVPGKSPPAVIQRASIADLI
DVLVIPERSSARPNVAVPAPKRSTGVALFRAVKSSRPGPRAYHAPTRNNVLPVEYSKLEV
AAPLLEQTGVYLPYRPSRISFAKAGEHPTALVESVAMGSIPAPIPDYVPSLPERTVSERL
LSASQLETVVYAGHAWAQWIPGNFKPDKEGVGLILAEDGHTYRKGFFLGDGTGAGKGRQI
AACILDNWLQGRRRNIWVSKNAPLLEDARRDWTALGGLSGDIQPLSNWKIDEPIALDQGV
LFVSYPTLRSMRGDSTRLKQIVDWAGADFEGVIAFDEAHEMGGVAGGEGALGAKDGSQQG
ICGVLLQNHLPAARILYASATGASVVNNLAYAVRLGLWGPGTAFPDREQFISGISKGGIA
AMELVARDLKATGLYVARALSFAGVEYEILRHELTPAQIEIYDTYADAWSIIHQNMERAL
ELTGVVDGLENATLNSGAKASARSRFESTKQRFFGQVLLSMKLPTVIAAVREHLKANQSV
VMQLVTTAESILDRRLGSLSPDERAELEIDLSPREYVIDYLERAFPTRQMRVFTDDTGAQ
RSLPMEDDAGNPVYNPEAEAARARLIEHLCALPPITSALDGILEQFGHDDVAEVTGRTKR
LVSTADGRQKLENRSARTSQAEAAAFMQGRKRILVFSDAGGTGRSYHASRDVPNQEQRVH
LLLEPGWRADRAIQGLGRTHRTHQASTPLFRPVTTDCKGELRFTSTIARRLDSLGALTRG
QRQTGGQNLFDPADNLESEYACAALVSWFHLLVGGKLTSISHAEFERRTGLELCDKDGVM
KDDLPPIQRWLNRILALPIALQNRIFDEFLSLVETRVSTAREAGRLDVGVETILVDTATL
IDDTLLRTDPVSGATSHLLTIEIARRRTPVSLDRILRIGDCDGTAEFMVNAKSGKVALQT
RARALMEEKEGTPIPRIELTRPTRREYMREDDLYESAWAPIDREAFCAKWLEETEEAANT
VDTETIRLATGLLLPIWSALPSDHLVVNRIADKAGNSWLGRLVFDEHVVQLFTKLGIGQA
ETLPAPNIVKSAMSGRSVDLTRPFPMTIKRALVNGSSRIELVGAPPSQLAWLKSLGCFTE
VIQYRTRVFLPVPSAADVVERLIAGTG
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcttcgacacggccgcccaggctgatcgcgaggctgtccgcctcctcctt
cctcatctccagtccggcgatcccgtccaccgccgggtactaaaccaagcgatgtcggcg
gctttcggtgggtccgatgccgatggtcactggacccagcgcgatagctttgaactcctc
gagcacgcgctttccatccatctgcaggcaagcgggtcaattctctccggaatggcggat
atccgtcccctgatcgccctctccgagcgcttgccgacccagaccgtccgcagcgaaaat
cagatcgaatggcagcaattctcgaccccgattgatatcgcgggcatcctcactttgctg
gccgacgtgcagccggaggatgtcatcctcgaaccgagcgccggtaacgggctcctggtc
gcgcagctcccgacccacaaggcgctccatctcaacgaactggacccgcttcgtcgaggc
aggcttcacgccgctttcccctcggcaatcgtcacaggccacgatggagcaacgatcaac
tcgacactcgcttcgtttgatcggccaacgctgatccttatgaatccgccgttctcacgg
tccatcggccgcggagctgacgactatgccgctgttcgccatctgcaggcggcactgcgt
cgcctggtcccgggtggccgactggttgcgatcatgcccgactggtttggcccgggcgcc
cggatgcgcgaccagtacgaaaccgttttgcgcgacgtgaccgtccgaagcgccattcgc
ctggaaaaatgctaccagaagcacgggacctcgatcgcggttcgcatcttcgtcatcgac
aaggtcccgggcaaatcgccgcccgcggtcatccagcgcgcgtcgatcgccgatctcatc
gatgtcctcgtcattcccgaacgatcgtccgcacggcccaatgtggcggtgcccgctccg
aagcgatcgacgggggtggccctcttccgcgcggtcaagagcagccgaccagggcctcgt
gcctatcacgccccgacacgcaacaacgtcctaccggtcgaatattcgaagctcgaggtt
gctgctccgctgctcgagcagaccggcgtctatctaccctaccgcccgagccgcattagc
ttcgccaaggctggtgagcatccgacagccctcgtcgaatccgttgcgatggggtcgatc
ccggcaccgatcccggactacgtgccatctctccccgaacggaccgtcagcgaacgtctt
ctatcggcctcgcagctcgagaccgttgtctatgcgggccacgcctgggctcaatggatc
cccggaaacttcaaacccgacaaagagggcgtcggcctgatcctcgccgaggacggtcat
acttatcgcaaaggattctttcttggcgacggcaccggcgccggcaagggacgccagatt
gcggcctgcatactcgacaactggctgcagggccgtcgccgcaatatctgggtctccaag
aacgcccctctcctcgaagatgcgcgccgcgattggacggcgttgggtgggctcagcggt
gacattcagccactttccaactggaaaatcgatgagccgatcgccctcgatcagggtgtg
ttgttcgtaagctatccgaccctgcgctccatgcggggcgattcgacgcggttgaagcag
atcgtcgattgggccggcgctgacttcgagggtgtcattgctttcgacgaagctcatgag
atgggcggcgtcgcaggcggggagggggctcttggcgccaaggacggatcccagcagggc
atctgcggggtgctgctacagaaccatctaccggcggcacggattctctatgcctcggcc
accggcgcgtcggtcgtcaacaatctcgcctatgccgtgcgcctcgggctatggggaccg
ggcacggcctttcccgatcgcgagcaattcatcagcgggatcagcaaaggcggtatcgca
gcgatggagcttgtcgcgcgcgacctcaaggcgacgggtctctatgtggcccgggccctc
agcttcgctggcgtcgagtatgagatcctgcggcacgagctgacccccgcccagatcgag
atctacgacacctacgccgacgcctggtcgatcatccatcagaacatggagcgggcgctc
gaattgacgggcgtggtcgacggactggaaaatgcgacacttaatagcggggccaaagcc
tccgcccgctcgcgcttcgagtccaccaagcagcgcttcttcggccaagtgctgctctcg
atgaagctgccaaccgtgattgccgccgtccgggagcacctgaaggcgaaccagtcggtc
gtgatgcaactcgtcaccaccgccgaatccatcctcgaccggcgcctgggttcgctcagt
ccggatgaacgcgccgaactggagatcgatctgtctccccgcgaatatgtgatcgactat
ctcgaacgcgcctttccgacacggcagatgcgggtgttcacggacgataccggcgcgcag
cgctcgctcccgatggaggatgacgcgggcaatcctgtctacaatcccgaggccgaggcc
gcgcgagctcgccttatcgaacatctctgcgctttgccgccgattacctccgcgctcgat
ggcatcctcgagcagttcggacacgacgacgtcgccgaggtgactggacgaaccaagcgt
ctcgtctcgaccgctgacgggcggcagaagctcgaaaaccgctcagccaggaccagccag
gccgaagctgccgcgttcatgcagggccgcaagcggatcctcgtcttttcggatgccggt
gggacggggcgctcatatcacgcctcgcgcgatgtccccaatcaggagcagcgtgttcat
ctgctgctcgagccggggtggcgtgccgatcgcgcgatccagggcctggggcgtacccat
cgcacccaccaggcgagcacaccgctgttcaggccggtgactaccgactgcaagggtgag
ctgcgattcacaagcacgatcgcccgccgcctcgacagtttgggcgcattgacgcgcggg
cagcgccagaccggcggtcagaacctcttcgatcccgccgacaaccttgaaagcgaatat
gcctgcgcggccttggtgagctggttccatctgcttgtcggtggaaagctgaccagcatc
tcccacgctgagttcgagcgtcgcaccggccttgagctctgtgacaaggatggcgtcatg
aaggacgatctcccgcccatccagcggtggctcaaccggatactcgcgctgccgatcgct
ttgcagaacaggatcttcgacgagttcctctcgctcgtcgagacccgtgtctccaccgcg
cgcgaggccggtcgcctggatgtcggcgttgagaccatcctcgtcgacacggcaaccctg
atcgacgacaccttgctgcggaccgatccggtaagcggcgcgacctcccatctccttacg
atcgagatcgcccggcgccggacgcccgtttcactggaccggatactcaggattggagac
tgcgacggcacggccgagttcatggtcaacgccaagtccggaaaggtggcactacaaacg
cgggcccgcgcgctcatggaagaaaaggagggcacgcccattccgcgcatcgagctcacg
cgtccgactcgccgggaatatatgcgcgaggacgacctctatgagagcgcctgggcgccg
atcgaccgcgaggccttctgtgcgaaatggctcgaagaaactgaagaggccgcgaacacg
gtcgacaccgaaaccatccgccttgctaccggtcttctccttccaatctggtccgcgctt
ccgagcgatcatctcgtggtcaacaggatcgccgacaaggctggcaattcctggcttgga
cgtctcgtcttcgacgagcacgtcgttcagctcttcacgaaactcggcatcggtcaggcc
gagaccctgccggcacccaatatcgtcaaatcggccatgtctggtcgaagcgtcgatctg
acgcgcccgttcccgatgaccatcaagcgtgcgctcgtgaatggttcgtcgcgcatcgaa
ctggtcggcgcgccgcccagccagcttgcttggctcaagtcgctcggctgtttcaccgag
gtgatccagtatcgcacacgggtattcctgcccgttccgagcgcggccgacgtcgtcgag
cggcttattgccgggaccggctag
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