Sphingomonas sp. KC8: KC8_15095
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Entry
KC8_15095 CDS
T04987
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KC8_15095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spkc03021
]
KC8_15095
03400 DNA repair and recombination proteins [BR:
spkc03400
]
KC8_15095
Enzymes [BR:
spkc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KC8_15095
Transcription machinery [BR:
spkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KC8_15095
DNA repair and recombination proteins [BR:
spkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KC8_15095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ARS28606
UniProt:
A0A1X9YIK2
LinkDB
All DBs
Position
3159710..3160051
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AA seq
113 aa
AA seq
DB search
MARVTVEDCVDKIPNRFDLVLLAAQRARQISGGAELTLDRDRDKNPVVALREIAEQTVTP
VDLHEAVVSNLQRVRVDDEDAPDEVGSLAASAEALRLTAAAPPRNQNIGSDYE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgttaccgtcgaggattgcgtcgacaagattccgaaccggttcgatctggtg
ctgttggcagcccagcgtgcgcgccagatttccggcggtgcggagctgacgctcgatcgc
gatcgcgataaaaatccggtggtcgcgctgcgcgagatcgccgaacagaccgtaaccccg
gtcgatctgcacgaagcggtggtgtcgaacctccagcgcgtgcgcgtggacgatgaagat
gcgccggatgaagtcggctcgctggccgcgtcggccgaagcgctgcggctcaccgccgct
gcgcccccgcgcaaccagaatatcggcagcgattacgaataa
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