KEGG   Sphingomonas sp. KC8: KC8_15920
Entry
KC8_15920         CDS       T04987                                 
Name
(GenBank) conjugal transfer protein
  KO
K20529  type IV secretion system protein TrbD
Organism
spkc  Sphingomonas sp. KC8
Pathway
spkc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:spkc00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KC8_15920
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spkc02044]
    KC8_15920
Secretion system [BR:spkc02044]
 Type IV secretion system
  Trb secretion system protein
   KC8_15920
SSDB
Motif
Pfam: VirB3 Phage_holin_2_3
Other DBs
NCBI-ProteinID: ARS28769
LinkDB
Position
3307129..3307392
AA seq 87 aa
MSGHIEGFEVPIHGSLGAPILLGGAPRGLAIVNGTLAAAIGLGLQQWIAGIVVWAVGHSI
AVFATRRDPSFAPVLIRHLRQKGYLAC
NT seq 264 nt   +upstreamnt  +downstreamnt
gtgagcgggcatatcgaaggcttcgaggttcccatccacgggagcctcggagcgcccatc
ctccttggcggtgcgccacgcggcctcgcgatcgtcaacggcacgctcgcagccgcgatc
ggcctcgggctccagcagtggatcgcggggatcgtcgtttgggcggtcgggcacagcatc
gcggtgttcgcgacccgtcgcgacccgtccttcgcgcccgtcctgatccgtcatctccga
cagaagggctatctcgcatgctga

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