Sphingomonas sp. KC8: KC8_16400
Help
Entry
KC8_16400 CDS
T04987
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_16400
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_16400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ARS28859
LinkDB
All DBs
Position
complement(3405111..3407522)
Genome browser
AA seq
803 aa
AA seq
DB search
MKTVYLAAASMLAITTAPAHAQDAASAVAAESSGGLEDIVVTAQRREENLQRVPVAVTAM
TAAALDNARITNVNNLSGYAPNVQISNQGQQSTPTIQIRGIQSGTSDNAVDPKVGIYLDG
VYIGRSVGAIFDLADLERVEMLRGPQGTLFGRNSTGGAISLISAAPTGEFGISQQLSYGN
YNAFRSRTIVNLPQFGPLSLKVSYLHDQMEGDTRNLLGGKKIDLSLRQPGFGTLTYANRL
GEKNVDAVQVAARIDASDNLKIDYRFDYTDSNTVGRATQLLGPTGDGTGALAGAILQFQG
AVPLGGGVIYPGTGGITNLGKSQLDAVANASSNEHVVTQGHNLAIAWDVDDVLTVKTITA
YRKFKQDPYIYDLGSTGGLRFSAAQLGAVLAAGQDPAAIAGVFAGANQPGPNDSLFTLLT
SRSTRQKQFSQEVQFIFNWDRFDLTSGVFYFHENSPATSVLGIFQPVVNGVVVPTALDNV
FGSGVTATRAVNDSIAGYGQLTWHATDQIDVAFGARYTIDDRATSLFSVAGAAGSTLVPG
QTYKTSYEKLNYTGILTYRPNDDVTTYAKIATGYVAGGILGAIPYDPESLTSYEVGVKSK
MFDNRVRANLSAFYSDYKDLQIQTFVGGVQRFENAGKARIWGIEGEFQAAPIDGLTIDAN
FGYTNFKYKEYMQGGVNVADRVNVTYTPKWTARLGGQYDFPEFANGGNFFINVDSRYRSA
VPMTAFPTNNPVVDALLVTKKYVLADARAGVASLPISGTAIGISGWVKNIFNVDRATFGP
TAVNQVIVPDRGRTYGIDLSVKF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgtgtatctggcggctgcgtccatgctcgccatcaccaccgcaccggcgcat
gcgcaggatgcggcatcggccgtcgcggccgaaagcagcggcgggctggaagacatcgtt
gtcaccgcccagcgccgtgaagaaaatctgcagcgcgttcccgtcgccgtcaccgcgatg
accgccgcggcactcgacaatgcgcgcatcaccaacgtcaacaatctgagcggctatgcg
ccgaacgtgcagatttcgaaccagggccagcaatcgaccccgacgatccagattcgcggt
atccagtcgggcacgtcggacaatgcggtcgatcccaaggtcggcatctatcttgacggc
gtttacatcggccgttcggtcggcgcgatcttcgacctggccgatctggaacgggtggaa
atgctgcgcggcccgcagggcacgctgttcggccgcaattccaccggcggcgcgatcagc
ctgatcagcgcggcaccaaccggtgagttcggcatcagccagcaattgtcctatggcaat
tacaacgcgttccgttcgcgcacgatcgtcaacctgccgcagttcggtccgctgagcctg
aaggtttcgtacctgcacgaccagatggaaggcgacaccaggaacctgctcggcggcaag
aagatcgatctcagcctgcgccagccgggctttggcacgctcacttatgccaaccggctg
ggcgaaaagaatgtcgatgcggtgcaggtcgcggcgcggatcgacgcgtcggataatctg
aagatcgactatcgcttcgattataccgattccaacacggtcggccgcgccacccagttg
ctcgggccgacgggcgacggcaccggcgcgcttgccggcgcgatcctgcagttccagggg
gcggtgccgctgggcggcggcgtcatttatcccggcacgggcggcatcaccaaccttggc
aagagccaactcgacgcggtcgccaacgcatccagcaacgaacatgtcgtaacgcagggc
cataatctggcgattgcgtgggatgtcgacgacgtgctgacggtgaagaccatcaccgcc
taccgcaagttcaagcaggatccctatatctacgacctcggttcgaccggcgggctgcgt
ttcagcgcagcgcagttgggcgcggtgctggccgccggccaggatcccgctgcgattgcg
ggcgttttcgctggcgcaaatcagcccggcccgaacgacagcctgttcacgctgctgacg
tcgcgatcgacccggcagaagcagttcagccaggaagtgcagttcatcttcaactgggac
cgtttcgacctgacatcgggcgtgttctacttccacgaaaattcgccggcgacgagcgtg
ctgggtatcttccagccggtcgtgaacggcgtggtcgtaccgacggcgctcgacaatgtg
ttcggcagcggtgtcaccgcgacgcgcgcggtgaacgattccatcgcgggctatggccag
ttgacctggcacgcgaccgaccagatcgacgtggcatttggcgcgcgctacacgatcgat
gatcgtgcaacctcgctgttcagcgtggccggcgcggcgggcagcacgctggttccgggc
cagacctacaagaccagctatgaaaagctgaactataccggcatcctcacctatcgcccg
aacgatgatgtcacgacctatgccaagatcgcgaccggctatgtcgccggcggcatcctg
ggcgccattccctatgatccggaatcgctgaccagctacgaagtcggcgtgaaatcgaag
atgttcgacaaccgcgtccgcgccaacctgtccgctttctattcggactataaggatctc
cagatccagacgttcgtgggcggcgtgcagcggttcgaaaatgccggcaaggcgcgcatc
tggggcatcgagggcgaattccaggccgccccgatcgatggcctgacgatcgatgccaat
ttcggctacaccaacttcaaatataaggaatatatgcaaggcggggtaaacgtggccgac
cgggtcaacgtcacctacacgccgaaatggaccgcgcgtctgggcgggcaatatgatttc
cccgaattcgcgaatggcgggaatttcttcatcaacgtcgactcgcgctatcgttcggcc
gtgccgatgaccgcgttcccgaccaacaatcccgtggtcgatgcgctgttggtcaccaag
aaatatgtcctcgccgatgcccgcgccggtgtcgcttcgctgccgatcagcggcaccgcg
atcggcatttcgggctgggtgaagaacatcttcaacgtcgatcgggcgaccttcgggccg
accgccgtcaaccaggtgatcgtgccggatcgtggccgcacctacggcatcgatctgtcg
gtgaagttctaa
DBGET
integrated database retrieval system
