Sphingomonas sp. KC8: KC8_17875
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Entry
KC8_17875 CDS
T04987
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
spkc
Sphingomonas sp. KC8
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spkc02000
]
KC8_17875
Transporters [BR:
spkc02000
]
Other transporters
Pores ion channels [TC:
1
]
KC8_17875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ARS29142
LinkDB
All DBs
Position
3689235..3693407
Genome browser
AA seq
1390 aa
AA seq
DB search
MSEAAQDKPPERRRRIWAPLRWLMWLLAGLVVMAGAALVVIDTGPGHRFIVDRIAALSPS
SGLKIRIGRIDGSIWGEAKLRDLRIYDPRGLFLEVPELDVAWRPRAWLANTLHIDRLATD
IAILHRLPRLNPGKKPGGAILPGFDVHIGDLDIAAIRLEPAVAGQRRVGQIKGKADIRNG
RALIDLKGSTNAGDRLKLLLDAEPDRDRFDFDANLVSPKGGVIAKVAGPDLPIKLAISGD
GSWKIWKGIAKLDVGAVHAVDLALGVREGHYSLSGELAPSALLKGKLQRLTAPRILVTGE
ATLADRQLTSTLSLRSAALTMDMSGVLDLANSAFDGVQLNARLLKPPAMFPNMTGTNVRL
RVQLNGPFKTAGFDYLLTADRAAFDETGFETVRAQGRGRLSDPPVRLPVRLTARRVTGVG
DIAGGILANLAVDGVLNVTAKDVRGDGLQLSSDKLKGKLSLYLNLVTGAYDVGVSGGLNR
YLIPGIGLVDVTSDLKVVPGAGGRGTVVKGTGRAWVRRFDNAFFASLAGGLPTIETGLVR
GPDGILLLRDLRLRGPGISIAGNGMRRRDGTFYFEGTGRQKDYGPFTMKLDGDISRPKVD
LALARPMDALGLRDVRLFLDPNAQGFAYRAAGGSTLGPFTSNGQILLPAGSPATIGVAAL
DVANTRASGAMRSEPGGFLGRLALDGGGLQGELLFRPVLGQQEIEAHVAMREAHFPGPPE
IMVRRGRVDGSVRLDPSGMSVTGRLAAQGVRRGAVSLGRLRADAELAGGHGKITAMLAGT
RGRAFAVNAQAQVAPGRLTLTGEGTLDGRPIRLVAPAELARDGDGWRLAATKLQFNGGTA
TLGGRYSSVALDIDGGLDRMPLSALDILLPRLGLGGQATGRFNYHSEAGGLPSGRADIKV
RGLTRSGLVLSSAPVDLGIVAALSGDSAVARAVVASGGKTVGRAQARLAPLPAGGDTYDR
LMNAPLFAQLRYNGPADTLWRLTGIETIDMSGPLAVGADVSGQLADPQIRGSLKTDGARL
ESAVSGTIITGVKASGRFGGSRLVIDSFAGSTRDGGSVSGHGTIDLSSANGFGMDLAVDA
NDAVLINRDDIGATVTGPLRIVAADGSGLISGDVALNRGRFRLGRAAAATIPRLTVTEIN
RPADDADVAEPPMPWRLDLKAKARNRLTVSGLGLDSEWRADLAVKGTIDNPAISGRADLV
RGGYEFAGRRFDLERGSIRFLGEAPPDPVLDIVAEADIQGLNATIRVSGTGLRPEIAFTS
VPALPEDELLSRLLFGTSITNLSAPEALQLAAAVASLQGGGNGLNPINAVRQAAGLDRLR
ILPADVTTGQRTSIAAGKYITRRTYVEVITDGQGYSATRLEFQITRWLSLLSSISTLGRT
SANVRVSKDY
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaggccgcacaggataagccgccagaacggcgtcggcgcatctgggcgccgttg
cgctggctgatgtggctgctggctgggctggtggtgatggccggcgcggcgctggtcgtg
atcgatactggccccggccatcgtttcatcgtcgatcgcattgcggcgctgtcgccatcg
tcggggctgaagattcggatcggccgcattgatgggtccatatggggcgaggccaaactg
cgcgatctgcgcatctatgatccccgcggcctgtttctcgaagtgccggaactcgatgtg
gcctggcggccgcgggcatggctggccaatacgcttcacattgatcggctggcgaccgat
atcgccattctgcatcgcctgcctaggctgaatcccggcaagaagcctgggggcgcgatc
ctgcccggtttcgatgtccatatcggcgatcttgatattgcggccattcgccttgaaccc
gccgtcgcgggccagcggcgcgtgggccagatcaagggcaaggccgatatccgcaatggt
cgcgcattgatcgacctcaagggttcaaccaatgccggtgaccggttgaagctgctgctt
gatgccgaacccgaccgtgaccgcttcgacttcgatgccaatctggtttcgcccaagggc
ggggtgatcgccaaggttgccggccccgacctgccgatcaagctggctatatccggcgat
ggcagctggaaaatctggaagggcatcgccaagctcgatgtcggcgcggtgcatgccgtc
gatctcgcgcttggcgtgcgcgaagggcattattcgctttcgggagaattggcgccgtcg
gccttgctgaagggcaagctccagcggcttaccgcgccgcgcatccttgttaccggcgaa
gccacgttggctgaccgccagcttacctcgacattgtcgctgcggtcggccgcgctcact
atggacatgtcgggagtgctcgatctggcgaacagcgcctttgacggggtccagttgaat
gcccggttgctgaaaccgccggcgatgttccccaacatgacgggcaccaatgtccggttg
cgcgtgcagttgaacggaccgttcaagaccgcaggctttgattatctcctcaccgcggat
cgcgccgcgttcgacgaaacgggtttcgagaccgtgcgcgcgcaagggcgcgggcgattg
tccgatcctccggtcaggctgcccgtgcggctgactgcccggcgggtgacgggggttggc
gatatcgcgggcggcatcctcgccaaccttgctgtcgatggtgtgctgaacgtgaccgcc
aaagatgtgcgcggcgatgggctgcagctgtcgtcggacaagttgaagggcaagctgtcg
ctctatctcaaccttgtcacgggcgcctatgacgtgggcgtttccggcggcctgaatcgc
tatctcatccccggcatcggattggtcgatgtgaccagcgatcttaaggtcgtgccgggg
gcgggcgggcgcggcacggtcgtcaagggcacggggcgcgcctgggtgcgtcgtttcgac
aatgcgttcttcgcgtcgctggccggtggtttgccgacaatcgaaaccgggctggttcgc
gggccggatggcatcctgctgttgcgtgacctgcggttgcgcgggccgggcatcagcatt
gcgggcaatggcatgcgccggcgcgacggcaccttttatttcgaagggacaggccggcag
aaggattatggcccgttcacgatgaagctggatggggatatcagccggccgaaggtggat
ctggcgctcgcccggccgatggatgcgctggggttgcgcgatgttcggctgttccttgat
cccaacgcgcagggtttcgcctatcgcgcggcgggtggatcgacgctggggccgttcacc
agcaatggccagattctgctacccgccggcagcccggcaacgatcggcgttgcggcgctg
gatgtcgccaacacgcgtgccagcggagcgatgcgatcggagccgggaggctttctggga
cggctcgcgctcgacggcgggggattgcagggcgaactgctgttccgccctgtccttggc
cagcaggaaatcgaggcgcatgtcgccatgcgcgaggcgcattttccgggaccgcccgaa
atcatggttcgacgcgggcgggtcgacggatccgtccggcttgatccgtcgggcatgtcg
gtcacgggccggctggcggcgcagggcgtgcggcgcggcgcggtgtcacttggccgattg
cgggcggacgcggaactggccggcggtcatggcaagataacagcgatgctcgccggcacg
cgcggccgcgcattcgctgtcaacgcgcaggcccaggtcgcgcccggacgcttgacgctg
accggcgaaggcacgctggatggccgccccatccgtctggttgcgccggcggaactggcg
cgagacggcgatggctggcgtctggccgccacgaaattgcaattcaacggcggcacggcg
acgttgggcgggcgatatagctccgtagcgctggatatagatggcgggctggaccggatg
ccgctgtcggcgcttgatatattgctgcctcggcttggattgggcgggcaggcgaccgga
cggttcaattaccattccgaagccggcgggctgccgagtggccgggcggatatcaaggtt
cgcgggttgacgcgatcgggccttgtcctgtcgtctgcgccggtggatctgggcattgtg
gccgcgctgtccggtgacagcgcggtcgcgcgcgcggtggtggccagtggcggcaagacg
gtgggtcgcgcgcaggcacggttggcgccgttgccggctggcggcgatacctatgatcgc
ctgatgaacgccccgctgttcgcgcaactgcgttacaacgggccggccgatacgctgtgg
cggctgaccgggatagaaacgatcgatatgtcagggccgcttgcggtgggcgccgacgtt
tccggccagttggccgacccccagattcgcgggtcgctcaaaacggatggcgcgcggctg
gaaagcgccgtcagcggcacgatcatcaccggggtgaaggcatcgggccggttcggcgga
tcgcgactggtgatcgacagctttgccgggtccacccgcgatgggggcagtgtttcgggc
cacggtacgatcgatctgtcatcggccaatggcttcggcatggatttggcggtcgatgca
aatgatgccgtgctgataaaccgcgacgacattggcgccacggttacagggccgctgcgg
atcgtggcggccgatggaagcggcctgatttccggcgacgtcgcgctcaatcgcggtcgt
ttccggctgggtcgggcggcggccgcaaccatcccgcgtttgacggtcactgaaatcaac
cggccggcggatgatgccgatgttgctgaaccgcccatgccgtggcggcttgatttgaag
gccaaggcacgcaatcgccttaccgtaagcgggcttggcctcgattccgaatggcgcgcg
gatcttgcggtcaagggcaccatcgacaatccggccatcagcgggcgggctgatctggtg
cgcggcggctatgaatttgccggccgccgtttcgatctcgaacgcggatcaatccggttt
cttggcgaagccccacccgatccggttctggatatcgttgccgaggcagacattcagggc
ctgaatgccacgatccgcgtgtctggcaccgggctgcgccccgaaatcgccttcaccagc
gttcccgctttgccggaagacgaactgctgtcgcggctgttgttcgggacgtcgatcacc
aacctgtcggcacccgaggcgcttcaactcgccgctgcggtcgcgtcgttgcagggggga
ggcaacggtctcaacccgatcaatgcggttcggcaggctgccggcctcgatcgcctgcgc
atcctgccggctgacgtgaccaccggccagcgcacgtcgatcgccgctggcaaatatatc
acccggcgcacctatgttgaggtgatcaccgacgggcagggctattcggcaacccgcctt
gaattccagatcacgcgctggctgtcgctattgtcgagcatttccacgctggggcgcacc
agcgcgaacgtccgcgtctcgaaggattattga
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