Sphingomonas sp. KC8: KC8_19990
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Entry
KC8_19990 CDS
T04987
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spkc
Sphingomonas sp. KC8
Pathway
spkc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spkc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KC8_19990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spkc03019
]
KC8_19990
Enzymes [BR:
spkc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KC8_19990
Messenger RNA biogenesis [BR:
spkc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KC8_19990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ARS29552
UniProt:
A0A1X9YL40
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All DBs
Position
complement(4105570..4106787)
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AA seq
405 aa
AA seq
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MTTRLPDAPWQHRAGLAALMSALDGANGAIRYVGGAVRDTLIGLDVSDIDCATILPPETV
AGRIRDAGFKAVPTGIAHGTVTAVLPGATVEVTTLRRDVSTDGRRATVAFTDDWREDAAR
RDFTINALFADPLNREVIDYFGGLDDLAAGRIRFIGDPLTRIAEDHLRILRFFRFHARFG
RGKPDAAGLAACAARANDLMGLSRERIADELLKLLALPDPRETVALMHAQGIFAPVLPEI
ETTGIARLARLIGREAIAGIAPDAARRLAALLPRDPVTVVQVAARLRLSNAIRGRLELLA
SPPAADAPPVPIAYRHPDAAIDLILLSDSDDAALAAAIAMLDGWQRPVFPLKGGDLVKRG
LRPGPRVAAALQSIERNWIAAGFPSDDWVERAAAAAVDQALRDRQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccgacttcccgacgccccctggcagcatcgcgcagggctggccgccctcatg
tccgcgcttgatggcgccaacggcgcgatccgttatgtcggtggcgcggtgcgcgacacg
ctgatcggccttgatgtatccgatatcgattgcgcaaccatcctgccgcccgaaaccgtg
gccgggcgcatccgcgatgccgggttcaaggcggttcccaccggcatcgcccatggcacg
gtcaccgccgttctgcccggcgcgaccgtcgaagtgacgacattgcgccgcgatgtctcc
accgacggacgccgcgctaccgtcgccttcaccgatgactggcgcgaagatgccgcacgg
cgcgatttcacgatcaacgccctgttcgcggatccgctgaaccgcgaagtcatcgattat
ttcggtgggctggatgatctggcggccgggcgcattcgcttcatcggcgatcccctcacc
cgcatcgccgaagatcatctgcgcatcctgcgtttcttccgctttcatgcgcgtttcggc
cggggcaagcccgatgccgccggccttgccgcttgtgctgcgcgcgccaacgatctgatg
ggcttgtcgcgcgaacggattgccgacgaactgctcaagctgctggcgctgcccgatccg
cgcgaaacggtggcgttgatgcacgcgcagggcattttcgcgccggtcctgccggaaatc
gaaacgacaggcatcgcccgtctcgcccggctgattggccgtgaggcaatcgcgggcatt
gcgcccgatgccgcccgccggcttgccgccttgctgccccgcgatcccgtcaccgtcgtt
caggtcgcggcgcggttgcgcctgtccaacgcgattcgcgggcgactggaattgctggcc
agcccgccggcagccgatgccccgcctgttccgatcgcctatcggcatcccgatgcggcc
atcgatctgattcttctatccgacagcgatgatgcggcacttgctgccgcgattgccatg
cttgatggctggcagcgcccggtcttcccgctcaaggggggggatctggtgaagcgtggc
ctgcgcccggggccgcgggtggcggccgcccttcagtcgatcgaacgcaattggatcgca
gcgggttttccgtcggatgactgggtagaacgcgcggcggcggcggccgtcgatcaggcg
ctgcgcgaccgccagtaa
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