Shewanella pealeana: Spea_0018
Help
Entry
Spea_0018 CDS
T00606
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
spl
Shewanella pealeana
Pathway
spl00071
Fatty acid degradation
spl00280
Valine, leucine and isoleucine degradation
spl00310
Lysine degradation
spl00362
Benzoate degradation
spl00380
Tryptophan metabolism
spl00410
beta-Alanine metabolism
spl00640
Propanoate metabolism
spl00650
Butanoate metabolism
spl00907
Pinene, camphor and geraniol degradation
spl00930
Caprolactam degradation
spl01100
Metabolic pathways
spl01110
Biosynthesis of secondary metabolites
spl01120
Microbial metabolism in diverse environments
spl01200
Carbon metabolism
spl01212
Fatty acid metabolism
Module
spl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Spea_0018
00650 Butanoate metabolism
Spea_0018
09103 Lipid metabolism
00071 Fatty acid degradation
Spea_0018
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Spea_0018
00310 Lysine degradation
Spea_0018
00380 Tryptophan metabolism
Spea_0018
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Spea_0018
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Spea_0018
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Spea_0018
00930 Caprolactam degradation
Spea_0018
Enzymes [BR:
spl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Spea_0018
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Spea_0018
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Spea_0018
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Spea_0018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF3048
Motif
Other DBs
NCBI-ProteinID:
ABV85347
UniProt:
A8GYG0
LinkDB
All DBs
Position
complement(20191..22344)
Genome browser
AA seq
717 aa
AA seq
DB search
MIYQSPTIEVELLEDNIAHLCFKAQGSVNKFDRETIDSLNAALDSIKQDSSIKALMLSSA
KDAFVVGADITEFLGLFAEEDTVLQSWLEQANVVFNKLEDLPFPTISAINGFALGAGCET
ILATDFRIADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITSGKDQRPEAALK
VGAIDAVVAPEQLKPAALKMLKDALIEKLDWQTRRAKKQAPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAVISVIEQAAQLDRAGALQVEHQAFIKLAKTEVAQALIGIFLNDQLVK
GKAKKAGKLAKKVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
TAQVKRGRSTPAKMAAVLNNITPALDYAPVKDADVVVEAVVEHPKVKSMVLAEVEQHVSE
DAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSDETVASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKTGKDAIDVMFEAERFGQKNSKGFYQYSVDRRGKP
KKDLDPTSYELLQAEFGEQKAFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDTMRELAANNGSYYQQA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctacaattgaggttgagttactcgaagacaatatcgcccacctg
tgcttcaaggcacaaggctcggttaataagttcgacagagaaaccatcgactcattaaat
gctgcactcgacagcatcaaacaagattctagcatcaaagcacttatgttaagttcggcc
aaagacgctttcgtcgttggcgccgatatcactgagtttctaggattatttgctgaagag
gacacggtcttacagtcttggttagagcaagccaatgtggttttcaacaagctagaagat
ctacccttcccaacaatttcggcaattaatggttttgcactaggcgcaggctgcgaaacc
attctagctacagacttccgtatagcagacaccactgcccgcataggtctaccagagact
aagctgggaattattccaggctttggtggtacggtacgtttacctcgcgtgatcggtgcc
gacaacgcacttgaatggatcacatcgggtaaagaccaacgtccagaagcggcacttaaa
gtcggcgcgattgacgcagttgtagctccagagcaacttaaacctgcagcgttgaaaatg
ctaaaagatgccctaatagagaagctagattggcagactcgccgcgctaagaaacaggcg
ccgctaacactaccaaagcttgaagccatgatgtctttcgccacagctaaaggcatggtg
tttaaagtagctggtaaacactaccctgcaccaatggcagtaattagtgtcatcgaacaa
gccgctcagttagatcgtgctggtgcgcttcaagtggagcatcaagcgttcatcaagcta
gctaaaacagaagtcgcacaagcattgattggcatcttcctcaatgatcagctcgtaaag
ggtaaggctaagaaagcgggcaagttagctaagaaagttaactcagctgcagtacttggc
gcaggtatcatgggtggcggtatcgcttaccaaagtgccagcaaaggtacaccaattgta
atgaaggatatcgctcaacctgcattggatttaggtttgggcgaagccgctaagctgctt
acggcacaagttaagcgtggccgttcaacccctgctaagatggctgcagtactgaacaac
atcactccagcactggactatgccccagtaaaagatgctgacgtggtggttgaagccgtt
gtcgagcatccaaaagttaaatctatggtactggcggaagttgaacagcatgtcagtgaa
gatgccatcatcacctcaaacacttcgactatctctatcaacctactggctaagagcctt
aaaaagcctgagcgtttctgtggtatgcacttcttcaaccctgtgcacaagatgccgcta
gtcgaagtcattcgcggtgagaacagctcagatgaaaccgttgcctcagttgtggcttac
gccagcaagatgggtaagacacctatcgtagttaatgactgcccaggctttttcgttaac
cgtgtactcttcccgtactttgccggctttagtggcctgcttgccgatggcgccgatttt
gctgctatcgacaaagtgatggagaagcagtttggttggccaatgggccctgcttacctg
ctcgacgttgtcggccttgatactggccatcatgcacaagcagtaatggctgaaggcttc
ccagaccgtatggggaaaactggtaaagatgccatcgatgtgatgttcgaagctgagcgt
ttcggccagaagaacagtaaaggtttctatcagtactcagttgaccgtcgtggtaagcca
aagaaagatttagacccaaccagctatgagttactacaagctgagtttggtgaacagaaa
gcatttgaatcagatgagatcatcgctcgcactatgatccctatgattattgagacagta
cgctgtcttgaagaaggaattatcgcttcgcctgctgaagcggatatgggcctagtttac
ggccttggtttcccaccatttagaggcggcgtgttccgctacctagatactatgggcgtc
gctaactttgtcgcgcttgccgacaaatatgcacacctaggtggtctataccaagtgacc
gacactatgcgcgaacttgccgccaacaatggcagctactaccagcaggcttaa
DBGET
integrated database retrieval system
