Shewanella pealeana: Spea_0057
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Entry
Spea_0057 CDS
T00606
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
spl
Shewanella pealeana
Pathway
spl02020
Two-component system
spl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spea_0057
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spea_0057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spl03021
]
Spea_0057
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spl02035
]
Spea_0057
Transcription machinery [BR:
spl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spea_0057
Bacterial motility proteins [BR:
spl02035
]
Flagellar system
Flagellar assembly proteins
Stator
Spea_0057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
HI1480
KORA
Motif
Other DBs
NCBI-ProteinID:
ABV85386
UniProt:
A8GYJ9
LinkDB
All DBs
Position
complement(71412..72134)
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AA seq
240 aa
AA seq
DB search
MNTALSAYQEAAEEVAINRLAESQVMKQYLPLVKRSVSQLRSHCGIALAIEDMEQIGMMA
LLESARRYPGEYDNGFLSFAGQRIRGAILDELRRQDWRPRPVRQQAHELNDMVRKLTRSL
KREPTDLEVAQSMGLSQVEYRERLFASQSESMRSLDELIGDGGHFEDKSDMLEQFSTKET
LFQAILKLNKREQIILSLYYQHELNLKEIAATLGLTETRICQLHKHAVKQLQQIYQEWER
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgcactatctgcctatcaagaagctgctgaagaagttgcgattaaccgtctc
gccgaaagtcaggtgatgaagcaatacctccctttagttaagcgttccgtatctcaactt
agaagccattgtggtattgcgctcgcgatagaagatatggaacagataggcatgatggcg
ctattagagtcagcccgtcgctacccaggtgagtacgacaatggctttttgtcttttgca
ggacaacgtattcgtggcgcgattctagacgagctacgccgccaagattggcggccacgt
cccgttaggcagcaagcccacgaacttaacgatatggtacgaaaactcactcgttcgtta
aagcgagaacccactgatttggaggttgcacaatctatgggacttagccaagtggagtat
cgagaacgcctatttgcatctcagtctgaatcgatgcgtagcttggacgaactcattggt
gacggcggacactttgaagataaaagtgacatgttggagcaattttcaacaaaagaaacg
ttattccaagctattttaaaattaaacaaaagagaacagataattctgtcgctttactat
cagcatgaactcaatttaaaagaaatcgccgcaacattaggactgactgagacacgtatt
tgccagctgcacaaacacgcagtgaaacaacttcagcagatctatcaagaatgggagcgg
taa
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