Shewanella pealeana: Spea_0085
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Entry
Spea_0085 CDS
T00606
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
spl
Shewanella pealeana
Pathway
spl02020
Two-component system
spl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spea_0085
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spea_0085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spl02022
]
Spea_0085
02035 Bacterial motility proteins [BR:
spl02035
]
Spea_0085
Two-component system [BR:
spl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Spea_0085
Bacterial motility proteins [BR:
spl02035
]
Flagellar system
Flagellar assembly proteins
Others
Spea_0085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_19
AAA_2
MCM
AAA_3
AAA_22
AAA_7
nSTAND3
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ABV85414
UniProt:
A8GYM7
LinkDB
All DBs
Position
complement(94655..95962)
Genome browser
AA seq
435 aa
AA seq
DB search
MNPSSLRFVDADLTLSCQNRLVQQGFNLYLPDDKDSPWLSLINLSHCASQDVPVRLRQFP
GKHQVALLNPEQTELASIAMQCGVQDYLLLPIDAEQLCSLLQRLRRLELPNNELICAAPV
SRQLLMLAHRAASTEATVLLTGESGTGKEPLARYIHRHSNRADKAFIAINCAAIPESILE
SILFGHIKGAFTGATTDQPGKFELANGGTLLLDEIGEMPLLLQAKLLRVLQEREVERLGS
HRSIALDIRVIAATNKDLRQAVQDGKFREDLFYRLDVLPIKILPLRQRREDILPIAEHFL
QRYKILAANQQCYFSEQARNLLLSHNWPGNVRELENTIQRALVMRRGQALQAEDLGLENQ
DGSILVEQNELGLKASKRQAEFQYIIDTLKRHNGHRIQTAEALGMTTRALRYKLAQMREE
GIDIERLLAQAGHAA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttctagtttaagatttgtcgatgcagatctaaccctatcttgccaaaataga
ctggttcaacagggctttaatttatacttgcctgatgataaagatagcccttggttaagt
ttgatcaacctttctcattgcgcgagtcaggatgtacccgtacggctacgacaatttcca
ggtaagcaccaagtcgccctgctcaatccagagcaaaccgagcttgccagtatcgccatg
cagtgtggtgtacaagattacctgttactgccaattgatgcagagcaactgtgctcacta
ctacaaagattacgtcgtttagaactgcccaataatgagttaatttgcgcggctccggtt
agccgccagctgctaatgctagctcaccgagctgcgagcacagaggccacagtactactc
accggcgaaagcggcacaggtaaagagccgctagctcgttatattcaccgccattccaac
cgtgccgataaggcttttatcgcaatcaactgcgcagctattcctgaaagcattctagaa
tctatcctgtttggtcacatcaagggggcatttacgggtgccacaaccgaccagcccggt
aagttcgaactcgccaacggcggaacgttactgctcgatgaaatcggtgagatgcctctg
cttttacaagccaaactactgcgtgtactgcaagagagagaggttgagcgattaggcagt
cacaggtcaattgcgttagatattcgggtcattgccgccaccaacaaagatctgcgtcaa
gcggtgcaagatggcaaattcagagaagacctcttctatcgcttagatgtactgccgata
aagatattaccactgcgtcagagacgcgaagacattctgcccattgccgaacattttcta
cagcgatacaaaattcttgcggcaaatcagcaatgctacttcagtgagcaggctcgaaac
ttactgttaagccacaactggcccggcaatgtgcgcgaactagaaaataccatccaacgc
gcgctggttatgcgacgtggtcaagcattacaagccgaagatctcggcctcgaaaatcaa
gacggttcaatcttagtagaacaaaatgagttagggcttaaggcctctaaacgtcaggct
gagttccaatacattattgacacgcttaagcgccacaacggccataggatccaaacggct
gaggccttgggaatgacgacacgagcattgcgatacaagctggctcaaatgcgagaagaa
gggatcgatattgaacgcctcctcgctcaagcaggtcatgctgcgtaa
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