Shewanella pealeana: Spea_0102
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Entry
Spea_0102 CDS
T00606
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spl
Shewanella pealeana
Pathway
spl03030
DNA replication
spl03410
Base excision repair
spl03420
Nucleotide excision repair
spl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spea_0102
03410 Base excision repair
Spea_0102
03420 Nucleotide excision repair
Spea_0102
03440 Homologous recombination
Spea_0102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spl03032
]
Spea_0102
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_0102
Enzymes [BR:
spl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spea_0102
DNA replication proteins [BR:
spl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Spea_0102
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Spea_0102
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spea_0102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABV85431
UniProt:
A8GYP4
LinkDB
All DBs
Position
complement(113799..116555)
Genome browser
AA seq
918 aa
AA seq
DB search
MPKIADNPLILVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLNQYKPSQMAV
VFDAKGKTFRNDMYSEYKAQRPPMPDDLRTQIEPLHRIIKALGLPLVSISGVEADDVIGT
IATQASKEGRAVLISTGDKDMAQLVDENVTLINTMTNTIMGPAEVTEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTALAMLTGVGGVDKILAAPEKMPELGFRGSKTMPAKIIEHA
DMLKLSYELATIKLDVELEQDWHQLSITPADKDELIKCYGEMEFKRWLAEVLDNKGDTTA
ATESEDDAPAAKLDIEVEYDTILSLEQLDCWIEKLTAAELIAIDTETTSLNYMEAKLVGI
SFAVEAGKAAYLPLEHDYVDAPEQLDRALVFEKLQPLLEDENLKKVGQNLKYDISIFANI
GITLRGVQFDTMLESYVFNSVASKHNMDDLALKYLGHKNISFEEIAGKGVKQLTFNQIPL
ETAAPYAAEDADITLRLHQHLWSRLEKLPELASVFTDIELPLVNTLSNIERQGVLIDSML
LGQQSEELARKIDELEHKAHEIAGEPFNLSSPKQLQALFFEKLGYPVIKKTPKGAPSTAE
EVLVELALDYPLPKIILEHRSLAKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATGRLSS
SEPNLQNIPIRTEEGRRIRHAFIAPEGKKILAADYSQIELRIMAHLSQDTGLLTAFAEGK
DIHKATAAEVFDVDFSEVTSDQRRRAKAVNFGLIYGMSAFGLAKQLDIPRAEAQSYIDTY
FKRYPGVLKYMEETRAIAADLGYVSTLFGRRLYLPAIKDRNAMRRQAAERAAINAPMQGT
AADIIKKAMINIAQWIETETQGEIIMIMQVHDELVFEVDEAKADSLQAKVCELMAAAAKL
DVELLAEAGIGDNWEQAH
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaattgccgacaaccctttaattcttgtggatggttcttcatacctctaccgc
gcctactatgcaccacctcacctaacgaattctaagggagaagcaactggtgccgtatac
ggcgttatcaacatgcttcgtagcctactaaaccaatataagccatcacaaatggctgtg
gtttttgacgcaaaaggcaaaacattccgtaacgacatgtattcggaatataaggcgcag
cgtccacctatgcctgatgatctacgcacgcaaatcgagccgttgcatagaatcattaaa
gctctgggtttacctcttgtatccatttctggcgttgaagccgacgatgttatcggcacc
attgcgacccaagccagtaaagaaggccgcgcggtattgatcagcaccggcgataaagat
atggcgcaattagtggatgaaaacgtcacgctaattaataccatgactaacaccatcatg
gggccggccgaggtcaccgagaaatttggtgttggaccagagttaattatcgacttacta
gccttgcaaggtgataaggccgataacattccaggcctgcccggtgttggcgagaaaacg
gcactcgctatgctaacaggtgtcggtggtgtcgataagatccttgctgcgccagagaag
atgccagagctaggctttcgcgggtcgaaaactatgccagctaagattattgagcatgcc
gatatgctcaaattgagctatgaacttgcaaccatcaagttagatgtcgaacttgagcaa
gattggcatcaactgtcgataacacctgcagacaaagacgaactcattaagtgttacggt
gagatggagtttaagcgctggctagcagaagtgctcgataacaagggcgataccacagca
gccacagagtctgaagatgatgcccctgcagcaaagctagatatcgaagttgagtacgat
accattctgagcctagagcaactcgattgctggattgaaaaattaacagctgcagagctt
atcgccatcgacaccgaaaccactagcctcaattatatggaggctaagctagtcggcatc
tctttcgcggttgaagcaggtaaggcggcttatctacctctagagcatgactacgtcgat
gctcccgagcagttagatcgcgcccttgtatttgaaaaactacaaccactgcttgaagat
gaaaaccttaaaaaagttggtcaaaatctaaagtacgacatcagcatttttgccaacatt
ggcatcactttacgtggcgtacagttcgatacaatgcttgagtcctatgtgttcaactct
gtggcttcaaagcacaacatggatgatttggcacttaaataccttggccataagaacatc
agtttcgaagagattgctggtaaaggcgttaagcagctgacctttaatcaaattcctctt
gaaactgccgcgccttatgccgcagaagatgccgatattactctgcgtctgcatcagcac
ctttggtcaagactagaaaagctgcctgagctggccagtgtattcactgatattgagttg
ccactggttaataccttatcgaatatcgaacgccaaggcgtgttaatcgacagtatgttg
ctcggtcagcagagtgaagagcttgcacgcaagattgatgagttagagcataaagcccat
gaaattgccggtgagccattcaatttaagctcgcctaaacagttacaggcgctattcttt
gaaaaactgggttatcccgtgatcaagaagacccctaaaggtgcaccttcaacagccgaa
gaagtgctggttgaattagcactagattacccgttgccgaagattattttagagcatcgc
agtctagctaaactaaagagcacttacacagataaactaccgttaatggttaatgccaaa
acaggccgtgtacatactagctaccatcaagccaatgcagcaacgggacgcttatcatcg
agcgagcctaatctgcagaatatcccaatccgtaccgaagagggtcgccgtattcgtcac
gcgtttatcgcaccagagggtaaaaaaatcctcgcagccgattactcacagatcgaattg
agaattatggcccatctttcacaagatacaggtctacttaccgcctttgcggaaggtaaa
gacattcataaagcgaccgcagcagaagtattcgatgttgattttagtgaagtgacctca
gatcagcgtcgccgcgctaaagcggttaacttcggtttgatctacggtatgtctgcgttt
ggtcttgccaagcagcttgatatcccaagagccgaagcacaaagctatatcgacacttac
tttaagcgctacccgggcgtactgaagtatatggaagagacccgcgccatcgcagccgat
ctaggttacgtatcgacgctattcggtcgtcgcctctatctgccagccattaaagataga
aacgccatgcgtagacaagctgccgaacgcgcagcgatcaacgcgcctatgcaaggtacc
gctgccgatatcattaagaaagccatgattaatatcgcacagtggattgaaaccgaaacc
caaggcgaaatcattatgatcatgcaggttcacgatgaattggtgtttgaggtcgatgaa
gcaaaggccgatagcttgcaggctaaggtgtgtgaattgatggccgccgcagccaagcta
gatgttgagctgttggcagaagctggcataggtgacaactgggaacaagctcactaa
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