Shewanella pealeana: Spea_0377
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Entry
Spea_0377 CDS
T00606
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spl
Shewanella pealeana
Pathway
spl00300
Lysine biosynthesis
spl00470
D-Amino acid metabolism
spl01100
Metabolic pathways
spl01110
Biosynthesis of secondary metabolites
spl01120
Microbial metabolism in diverse environments
spl01230
Biosynthesis of amino acids
Module
spl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Spea_0377
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Spea_0377
Enzymes [BR:
spl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Spea_0377
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ABV85705
UniProt:
A8GZG8
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All DBs
Position
456668..457912
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AA seq
414 aa
AA seq
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MDHFLYQADELYAEQCQVAELAKQHGTPLYIYSRATLERHWRAFDNAVSEHPHLICYAVK
ANSNIAVLNVLARLGSGFDIVSGGELSRVIEAGGDPTKVVFSGVGKTVSEMEMALNLGIY
CFNVESAAELEQLNLVALRLGKVAPVSLRINPDVDAGTHPYISTGLKENKFGIAMEEAEA
IFARANELPGLAVKGVDCHIGSQLTEIKPFLDAMDRMLALIDRLAEQGIEIKHFDVGGGL
GVTYDDEQPPQPDVYAAALLERLGDRDLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
ALVDGAMNDLIRPSLYSAWQKIVPVIERAGESHSYDVVGPVCETGDFLGKDRQLNVQEGD
YLAVRSSGAYGFTMASNYNSRPRAAELMVDGDKAYVIREREKVAQLWQGEQILP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttttatatcaggcagatgaactctacgcggagcagtgtcaagttgctgag
cttgcaaagcagcacggaacaccgctttatatctattctcgtgcgacactagagcgccat
tggcgtgcatttgataatgcggtgagcgagcatccacatcttatctgctatgcggtgaag
gctaactcaaacattgcagtgctaaacgtactggcacgtttaggcagtggcttcgatatt
gtctcgggcggtgagctgtctcgtgtgattgaagccggcggcgatcctactaaagtggtt
ttctctggcgtgggcaaaactgtcagtgagatggagatggcacttaacctaggcatctat
tgctttaatgttgagtcggcagctgagcttgagcagcttaaccttgtggccttgcgccta
ggtaaagtggcgccggtatcgctacgcataaaccctgatgtagacgcgggtactcatccc
tatatttcgactggcctgaaagagaataaatttggtatcgcgatggaagaggcggaagct
atctttgctcgtgctaacgaattgccgggtcttgcggtaaaaggcgtcgattgtcatatt
ggttctcaattaactgagattaagcctttcttagatgccatggatcgcatgttggcgcta
atcgatcgtttagcagagcaaggcatcgagattaagcatttcgatgtgggcggtggactc
ggagtgacttacgatgacgagcaaccacctcaaccagatgtatacgcagcagcgctactt
gagcgtcttggcgatcgcgatctcaagttgatctttgaacctggcagagcgattgcggcg
aatgccgggattttcgtcacccaagtgctatatctgaaagaaaacagcgataagcgtttt
gctttagtcgacggcgcaatgaatgacttgatccgtccatcactttacagcgcttggcag
aagatcgttccggttattgaacgtgcgggtgaaagccacagttatgacgttgtcggccca
gtttgcgaaacgggagacttcttaggtaaagaccgtcagcttaacgttcaggagggcgac
taccttgcggtgcgttcatcgggcgcctatggctttaccatggcgtctaattataattca
cgtccacgtgctgcagagctgatggtggatggtgataaagcctatgtcattcgagagcga
gaaaaagtcgctcaattatggcaaggcgagcagatcctgccgtaa
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