Shewanella pealeana: Spea_0802
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Entry
Spea_0802 CDS
T00606
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spl03009
]
Spea_0802
Enzymes [BR:
spl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Spea_0802
Ribosome biogenesis [BR:
spl03009
]
Prokaryotic type
rRNA helicases
Spea_0802
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_22
PhoH
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ABV86129
UniProt:
A8H0P2
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All DBs
Position
complement(993624..994859)
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AA seq
411 aa
AA seq
DB search
MPRMQFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLL
PALQHLIDFPRRYGGRARVLILTPTRELASQIHRYASHLATGLGLDTVIITGGVPYGPQE
EALQKNVDILVATPGRLMEYLDKGHFNAEEVEVLIIDEADRMLDMGFSAVVESIAIESVG
RKQTMLFSATLEGSDVGRFSHNLLTNPVKLEAEAPRSEKAKIHQWIHLADDKAHKFALLC
ALLKQEEVQRTIVFVKTRESVASLEGLLQKEGITCAFMRGDMEQKARFQALGRFTKGEVN
ILLATDVAARGIDIDDITHVINFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVV
GKIERYIEQPLKRRFVKDLRPKNKEAKPPGKKKPGPEGKNFSKKNKKKKKK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcatgcaatttgaagatctccagcttgacccttgtttgttagagtcactaaaa
gcaatgggccacaacaagcccactacgatacaacaacaaacaataccggttgccatggag
caaagagatattttagctcgtgcccctacgggtacaggtaaaacggcaagttttcttcta
cctgcgttgcaacaccttatcgattttccacgtcgatatggcggccgtgcacgagtattg
attcttactcctactcgtgagcttgccagccaaatccatcgttatgctagccaccttgct
actggtctaggcttagacacagttatcatcactggcggtgtgccttacggtcctcaggaa
gaagcgctacagaagaacgttgatatcttagttgccactccaggccgtttaatggagtac
ctagacaagggtcacttcaacgcagaagaagtagaagtactgatcatcgatgaagccgac
cgcatgctggatatgggcttctcggctgttgttgaaagcattgcaatcgagtctgttggt
cgtaagcaaactatgctgttctcagccacgcttgaaggcagtgacgttggccgtttctcg
cacaacctactgaccaatccggttaagcttgaagcagaagcaccacgtagcgaaaaagcc
aagatccaccagtggatccacctagccgacgacaaagcgcataagtttgccctgttgtgc
gctctattaaaacaagaggaagtgcaacgcactatcgtcttcgttaagacacgtgaatcg
gtagctagcctagaaggcttgctacaaaaagaaggcatcacttgtgcatttatgcgcggt
gacatggagcaaaaagcgcgcttccaggcattaggtcgtttcaccaaaggtgaagtgaat
atcttgctagcaactgacgttgccgcacgtggtatcgatattgacgatattacccatgtt
atcaacttcgatatgccacgctcagcagatacttatgtacaccgtatcggtcgtacaggc
cgcgctggcgctaaaggtacagctatatcactagttgaagcccatgacatccgtgttgtt
ggtaaaatcgagcgttatatcgagcaaccattaaagcgtcgcttcgttaaagatctgcgt
ccaaagaacaaagaagctaagccgcctggaaagaaaaagccggggccagaaggtaagaat
tttagcaagaagaacaaaaagaaaaagaagaagtaa
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