Shewanella pealeana: Spea_1039
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Entry
Spea_1039 CDS
T00606
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spl
Shewanella pealeana
Pathway
spl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Spea_1039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_1039
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Spea_1039
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Spea_1039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ABV86366
UniProt:
A8H1C9
LinkDB
All DBs
Position
1261937..1262626
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AA seq
229 aa
AA seq
DB search
MERGYVLHSRHFRDGSVIVNLLVDGKGRVDAVARLGGAKNSIRSIIQPFQPIIFQLHGKT
DLKNLKQVEAASPAVPLTGDCLYSGLYLNELLIRCLSVQHSAENLFFDYHRTLIAMATEF
NQSQLRYFEHALLLELGTMPSLDFDPSDAPITASGFYRLEQDHGFTPVIATAFNQHKFFT
GEMLVALNQRTLTTEHFLEAKKLMRQLLAPVLGDKPLHSRTLFAKKPKP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtggctacgttcttcatagcaggcattttcgtgatggtagcgtcatcgttaac
ttactggtagatggtaaggggcgggtcgatgctgttgcacgcctaggcggcgctaaaaac
tccattcgtagcattattcaacctttccaaccgattatctttcagttgcatggcaaaaca
gatcttaaaaacctcaagcaggttgaagctgctagtcccgcagtaccgttaacaggcgac
tgcttgtattcgggcctctatcttaatgagttgttgatccgttgtttatcggtgcagcac
agcgccgagaacctcttttttgattatcatcgcacgttaatcgccatggcgactgagttt
aatcaaagtcaattaagatactttgagcatgcattgctgctggagttgggaaccatgcca
tctctggattttgacccgagtgatgcgccaataacggcgagtggattttatcgcttagag
caagaccacggctttacccctgttatcgcgacagcctttaatcagcataaattttttact
ggcgagatgttggtcgctttgaaccagcgtacgctgacgacagagcactttttagaagct
aaaaagctgatgcgtcagttactcgctcctgtactgggagataagccactgcattcaaga
accttgttcgctaagaaacctaaaccttag
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