Shewanella pealeana: Spea_1189
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Entry
Spea_1189 CDS
T00606
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spl03016
]
Spea_1189
Enzymes [BR:
spl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Spea_1189
Transfer RNA biogenesis [BR:
spl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spea_1189
Prokaryotic type
Spea_1189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SLC35F
Motif
Other DBs
NCBI-ProteinID:
ABV86516
UniProt:
A8H1S9
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All DBs
Position
1443055..1444119
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AA seq
354 aa
AA seq
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MSELHYLYGKPTSTADLRTHNSDFQVQEILPFAPTGEGEHHLLHIRKEGLNTVEVAKMLS
GFAHVHPKEVTYAGQKDKHAITEQWFGVRIPGKETPNWEQLNSEQITVLSSSRHSKKLRI
GALAGNRFTLTLRNVSDMSDVVARIEKIGEQGVPNYFGEQRFGHDGKNLIFGRQMFTGRK
VKDRNKRSMYLSAVRSNLFNMAVSTRLAQHGTGTLTGDCVMLAGSKSYFVAEQWDETLVE
RLAKKDIQLSAPLWGRGLPLAQAEAAECEAQALESLATDKDGLEHAGLSQERRALLLEPQ
HLQYEVDEDTIILKFALPSGSYATSVLRELFVYQDVQEVARKQMLAAQNSGEAQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactacattatttatacggcaagccgacatcgacagccgacctgcgcacccac
aatagtgactttcaggtacaagaaattctaccatttgcccctacgggtgaaggtgagcac
catttactgcatattcgcaaagagggactcaacacagttgaagtggctaaaatgctatct
ggctttgctcatgtgcacccgaaagaggtgacctacgcagggcaaaaagataagcacgcg
atcaccgagcaatggtttggcgtacgtattcccggaaaggaaacaccaaactgggagcaa
ctaaatagcgaacagatcactgtacttagctcctctagacacagtaagaagctacgtatt
ggtgcgttggctggtaatcgttttaccttaaccttgcgcaatgtctctgatatgagtgat
gtggttgcgcgcattgagaagattggtgagcagggtgttccaaactactttggtgagcag
cgctttggccatgacggcaaaaaccttatatttggtcgtcagatgtttacaggccgtaaa
gtgaaagacagaaacaaacgtagtatgtatctttctgctgtgcgctcaaatctattcaat
atggctgtatccacgcgtttagcccaacatggtacaggcactcttactggcgactgtgtc
atgcttgctgggagcaagagttattttgtggctgagcagtgggatgaaactttagtcgag
cgtttagctaaaaaagacatacaactgtcggcgccattatggggacgtggtttaccgctt
gcacaagctgaggctgccgagtgtgaggcgcaagcgcttgaatcacttgcaactgataaa
gatggtttagagcatgcggggcttagccaagaaagacgcgcattgttacttgagccacaa
catctgcaatatgaagtagacgaagataccattattctaaaatttgcattaccatcaggt
tcttatgctacatcggtactacgagagttatttgtttaccaggatgttcaggaagtcgct
cgaaagcagatgctagccgcacaaaatagcggcgaggcacaatga
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