Shewanella pealeana: Spea_1357
Help
Entry
Spea_1357 CDS
T00606
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
spl
Shewanella pealeana
Pathway
spl02020
Two-component system
spl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Spea_1357
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Spea_1357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spl03000
]
Spea_1357
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spl02035
]
Spea_1357
Transcription factors [BR:
spl03000
]
Prokaryotic type
Helix-turn-helix
Other families
Spea_1357
Bacterial motility proteins [BR:
spl02035
]
Flagellar system
Flagellar assembly proteins
Others
Spea_1357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_7
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ABV86684
UniProt:
A8H297
LinkDB
All DBs
Position
1652848..1654281
Genome browser
AA seq
477 aa
AA seq
DB search
MMQTDQRILLVGNQSERINRLSCVFEFLGEQVELIDFDKLETYTKQTRFRAIVLPSENQS
KELIQSLTGTLPWQPFLMLGERGDIKTSNILGCIEEPLNYPQLTELLHFCQVYGQVKRPE
IPTSANQTKLFRSLVGRSEGIANVRHLINQVAGSDATVLVLGQSGTGKEVVARNIHYISE
RRNGPFIPVNCGAIPPELLESELFGHEKGSFTGAISARKGRFELAEKGTLFLDEIGDMPL
QMQVKLLRVLQERMFERVGGSKSISADVRVVAATHRNLETMIEKGDFREDLYYRLNVFPI
EMPALCERKEDIPLLLQELVSRVYNEGRGRVRFTQRAIESLKEHLWSGNVRELSNLVERL
TILYPGGLVDVNDLPIKYRHIDVPEYCVEISEEQQERDALASIFNDEEPIEIPETRFPSE
LPPEGVNLKDLLAELEIDMIRQALDQQDSVVARAAEMLGIRRTTLVEKMRKYGLSKD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaacagatcaacgaattctacttgtcggtaaccagtcagagcgaattaatcgc
ttgtcgtgtgtatttgagttcttaggagagcaggtcgaactgatcgacttcgataaactc
gagacgtacactaagcagacgcgctttcgcgcgattgttttaccttctgagaaccaatcg
aaagaacttatccagtctttgactggtacgcttccttggcagccttttttaatgttaggg
gaaagaggcgacattaaaacgtcgaatattctcggctgcatcgaagaacccttaaactac
ccacaattaactgagttactccacttttgtcaggtctatggtcaagttaaacgtccagag
atcccaactagcgcaaatcagactaaattatttagaagtttagtgggtcgtagcgagggt
attgccaatgttcgtcacctcattaatcaggtggcaggttctgacgctacagtattagta
cttgggcaatcaggaacgggtaaagaagtggttgctcgtaatattcactatatttcagaa
cgtcgcaatggaccgtttattccggtaaattgcggtgcgattcctccagaattactggag
agtgaactttttggtcatgagaagggttcattcaccggggcaatcagtgcacgtaaaggt
cgtttcgaacttgcggaaaaaggcaccttattcctcgatgagattggcgatatgccattg
cagatgcaagttaaattattacgtgtactgcaagagcgtatgtttgagcgtgttggtggc
agtaagtctatttcagccgatgttcgcgttgttgctgcaacccatagaaacttagaaacc
atgatagagaagggagattttagagaagatctctattaccgcctcaatgttttcccaatc
gaaatgcctgctttgtgcgaacgcaaagaagatatccccctgttactgcaagaattagtc
agccgtgtttataacgaaggccgcggccgagttcgtttcactcaacgtgcaatcgagtct
cttaaagagcacttatggtcaggtaacgttcgtgaactgtctaacttggttgaacgttta
acgattctttatccgggtggactggtcgatgtcaatgacttacctatcaagtaccgtcat
atcgatgttcctgaatactgtgtcgaaatcagtgaagagcagcaagagcgtgacgcttta
gcctctatcttcaacgatgaagagcctatcgagatcccagagacgcgattcccgagtgag
ttgccaccagaaggggtcaacttaaaagacttattggcagagcttgagatcgatatgatc
agacaagcactagatcaacaagatagcgtggttgcccgtgcagcagaaatgctaggcatt
cgtcgtaccaccttagttgaaaaaatgcgtaagtacggattgagtaaagattaa
DBGET
integrated database retrieval system
