Shewanella pealeana: Spea_1535
Help
Entry
Spea_1535 CDS
T00606
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spl03032
]
Spea_1535
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_1535
Enzymes [BR:
spl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Spea_1535
DNA replication proteins [BR:
spl03032
]
Prokaryotic type
DNA Topoisomerases
Spea_1535
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Spea_1535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Zn_ribbon_LysW
Motif
Other DBs
NCBI-ProteinID:
ABV86860
UniProt:
A8H2S3
LinkDB
All DBs
Position
1867129..1869819
Genome browser
AA seq
896 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHIRDLPTSSSSDAKVVSKTAAEVKKMSP
EEKAEYKSLKAKQALVARMGVDPEKGWKANYQTLPGKEKVVKELQTLAASADHIYLATDL
DREGEAIAWHLQQVIGGDESRYQRVVFNEITKTAIQDAFSQPSVLDTNMVNAQQARRFLD
RVVGFMASPLLWKKVARGLSAGRVQSVAVRLVVERESEIKAFVPEEFWDVHAELNTLTDD
LLKMQVVKFQGKAFSPVNEVEAQTAVSQLSQSSFVVAAREDRATSSKPSAPYITSTLQQA
ASTRLGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEALDNVRDMIGKEYGDNYLPESP
IRYGSKEGAQEAHEAIRPSNVKVSAASLSDMERDAQRLYELIWRQFVSCQMTPAKYDATR
LTVKAGDYELKATGRTLRFDGWTRVQTAIKKKNEEDNTLPYVAQGDAVTLKELLPKQHFT
KPAPRYSEASLVKELEKRGIGRPSTYATIISTIQDRGYVKVDNRRFFAEKMGEIVSDSLV
GSFEDLMSYDFTASMEQTLDDVAQGKLEWKKVLDGFYKDFTKQLEVAELPPEEGGMRPNE
MVITDNIKCPTCGRPMGIRTGTTGVFLGCSGYALPPKERCKTTLNLTPGEEAVSSGEDAE
TEALRAKHRCGICGTAMDSYLIDEARKLHVCGNNPTCNGYEVEAGQFKIKGYEGPIIECD
RCGNDMELKNGRFGKYFGCTNTECKNTRKLLRSGEAAPPKEDPIHLPELKCTKSDAYFVL
RDGAAGIFLAASTFPKSRETRGPLVEELVKYRELLWPKYQYLADAPVADDDGNLASVRFS
RKTKEQYVATDVDGKATGWTSKFVDGKWVTEAKAKPKPKAKAKPKAKPKAKATKAE
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctagtaatcgtcgaatcaccggccaaagccaagactattaataaatat
ctaggcaaagatttcatcgttaagtcgagtgtaggtcacatccgtgatctgccaacatca
tcgagttcagacgctaaagttgtcagtaagacagctgctgaagtcaaaaagatgtctcca
gaggagaaggctgagtataagagtttaaaagcgaagcaagctttagttgcgcgcatgggg
gtcgatccagaaaaaggctggaaagcaaactatcaaaccttaccaggcaaagaaaaagtc
gttaaggaactccaaactctggcagcgtctgctgaccatatctatctcgcaaccgatttg
gatagagagggagaggcgatagcttggcatctacagcaagtgattggtggagatgagtca
cgttatcagcgagtagtttttaacgaaattaccaagacagcgattcaagatgcatttagc
cagccatcggtgctagacaccaatatggttaatgcacaacaggcgcgtcgcttcttagac
cgtgttgttggctttatggcttctccactattatggaagaaggtcgcccgcggtctgtct
gctgggcgtgtacagtctgttgccgtccgccttgtggttgaacgcgaaagtgagattaaa
gcctttgtgccagaagagttctgggatgttcatgctgaactcaataccttaaccgacgac
ctgctaaaaatgcaggtggttaaattccaaggtaaagcattcagccctgtcaacgaagtc
gaagcgcaaactgcagttagtcagttatctcagtccagctttgtggttgccgctcgtgaa
gacagagcgacatcgagcaaaccatcggcaccttatattacatcgacgttacagcaagct
gcgagtacgcgcttaggctttggtgtgaagaagactatgatgatggcacaacgcttgtat
gaagcgggccacatcacttatatgcgtaccgactcgactaacttaagccaagaagcgctc
gataacgtgcgtgacatgattggtaaagagtatggcgacaactacctgcctgaatcacct
attcgttatggcagcaaagaaggcgcacaagaagcccacgaagcgattcgtccttcaaat
gtaaaagtgagtgcagcgtcgctatcagacatggagcgggacgcacagcgcctatacgag
cttatttggcgtcagtttgtgtcttgtcagatgacacctgcaaaatatgatgcgactcgc
ctgactgtaaaggcaggtgattatgagcttaaagcaacgggtcgtacgcttcgtttcgat
ggttggacgcgcgttcaaactgccattaagaagaaaaatgaagaagacaacactttgcca
tacgtggcacaaggtgatgccgtcacgctaaaagagctactacctaagcagcactttact
aaacctgcaccacgttacagtgaagcgtctttggttaaagagttagaaaagcgtggtatt
ggtcgtccatctacttacgctacgatcatttcaactatccaagaccgtggttatgtgaaa
gttgataaccgtcgcttctttgcagaaaagatgggtgaaatcgttagtgatagcttagtg
ggtagctttgaagatctaatgagctacgacttcactgctagcatggagcaaacattagat
gatgttgctcaaggtaagcttgagtggaaaaaagtactcgatggtttctataaagacttc
actaaacaattagaagtcgctgaattaccaccggaagagggcggaatgcgcccgaacgaa
atggtgattaccgataacatcaagtgtccaacctgtggccgccctatgggcattcgtacc
ggtacgactggtgtattcctaggttgctctggttatgcattaccaccaaaagagcgctgt
aaaacaacgttgaacttaacgcctggtgaagaggctgtgagtagcggtgaagacgctgaa
actgaagctctacgtgctaagcatcgctgtgggatctgtggcacagccatggatagttac
ttaatcgatgaagctcgtaaattacacgtatgtggtaacaacccaacatgtaatggttat
gaggtagaagcgggtcagtttaagattaaaggttacgaagggcctattattgagtgcgat
cgttgtggcaacgatatggagcttaaaaacggtcgtttcggtaagtattttggttgtaca
aacactgagtgtaagaacacgcgtaagctgcttaggagcggtgaggctgcgccaccaaaa
gaagaccctattcacttacctgaacttaagtgtactaagtctgatgcatatttcgtgtta
agagatggtgcggcggggatcttccttgcggcgagcacattccctaaatcacgagagact
cgtggcccgttagtcgaagagctagtgaagtaccgtgagctgttatggcctaagtaccag
tatcttgccgatgcgccagtggctgacgatgacggtaatcttgcatctgtacgctttagc
cgtaagactaaagagcagtacgttgcaacagatgttgatggtaaggcgactggctggaca
tcaaagtttgttgatggcaagtgggtgacagaggcaaaagccaagcctaagcctaaggcc
aaagcaaaacctaaagccaagccaaaagctaaggcgaccaaagccgagtaa
DBGET
integrated database retrieval system
