Shewanella pealeana: Spea_1698
Help
Entry
Spea_1698 CDS
T00606
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spl
Shewanella pealeana
Pathway
spl03030
DNA replication
spl03430
Mismatch repair
spl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spea_1698
03430 Mismatch repair
Spea_1698
03440 Homologous recombination
Spea_1698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spl03032
]
Spea_1698
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_1698
Enzymes [BR:
spl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spea_1698
DNA replication proteins [BR:
spl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spea_1698
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spea_1698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
GSPE_N1E
Motif
Other DBs
NCBI-ProteinID:
ABV87022
UniProt:
A8H385
LinkDB
All DBs
Position
2064506..2065192
Genome browser
AA seq
228 aa
AA seq
DB search
MENLRNLYLKTRLQFNALLSQDTVISGYHRALVTQISKPLSQLPLMAVDLEMTGLNSQFD
QILSIGLIPIRNGLLQVSHSKHLLVSIDGSVGDSAVIHGIVDNQLTQAVSPKLAMAWFLE
QTQGHVLVAHHAPLDLCFLKAEIQRCYGQTIQFVAIDTMAVEKRRLLMQIDVIKEGSLRL
DACRQRYGLPVYAAHNAAIDALACGELLLAQIAAIAGNDELSLFDLLN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttgagaaatttatacttaaaaacacgactacagtttaatgccttgctatct
caagataccgtgattagtggttatcatcgcgcattagtgacacagatctctaagccttta
tcgcaactgcccttgatggcagtggatctggagatgacagggttaaatagccagttcgat
cagatcttgagtatcggtctgatacccattcgcaacggtttactgcaagtatcccactcg
aagcatctgttggtgagcatagatggcagcgtcggtgacagcgcggtgatccatggaatt
gtagataaccaattaacccaagctgttagccctaaactggccatggcgtggtttttagag
cagacccagggccatgtgctcgtagctcatcatgcaccgttagatctttgcttcttaaaa
gccgaaattcagcgctgttacggtcagacgattcagtttgttgctatcgataccatggct
gttgagaagaggcgtctgctgatgcagattgatgtcatcaaagaggggagtttaaggctc
gatgcctgtcgtcaacgctatgggctacctgtttacgcagcgcataatgcggctatagat
gcgcttgcctgtggagaattattgctggcgcagatagcagcaattgcgggaaacgatgaa
ttaagtttatttgacttattaaattaa
DBGET
integrated database retrieval system
