Shewanella pealeana: Spea_2038
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Entry
Spea_2038 CDS
T00606
Name
(GenBank) hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
spl
Shewanella pealeana
Pathway
spl00020
Citrate cycle (TCA cycle)
spl00620
Pyruvate metabolism
spl00720
Other carbon fixation pathways
spl01100
Metabolic pathways
spl01110
Biosynthesis of secondary metabolites
spl01120
Microbial metabolism in diverse environments
spl01200
Carbon metabolism
Module
spl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spl_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Spea_2038
00620 Pyruvate metabolism
Spea_2038
09102 Energy metabolism
00720 Other carbon fixation pathways
Spea_2038
Enzymes [BR:
spl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
Spea_2038
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Gene cluster
GFIT
Motif
Pfam:
Fumerase
Fumerase_C
DUF5864
Motif
Other DBs
NCBI-ProteinID:
ABV87358
UniProt:
A8H471
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All DBs
Position
2465456..2466976
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AA seq
506 aa
AA seq
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MSKEVPVIKQADLIESVADALQYISYYHPKDFVDSMAEAYEREQSSAAKDAIAQILINSR
MSAEGKRPLCQDTGIVTCFVKIGMGVQWDKTDLTVQEMVDEGVRRAYTNPDNPLRASIVA
DPAGGRKNTKDNTPSVVHVEMVPGNHVDVAIAAKGGGSENKSKMVMLNPSDDIAAWVEKT
LPTMGAGWCPPGMLGIGIGGTAEKAAVMAKESLMDPVDIHELQARGAQTTDEKLRLEIFE
RANKLGIGAQGLGGVTTVLDIKIKSAPTHAASKPVVMIPNCAATRHVHFHLDGTGPALLT
PPSLEDWPEITWEVGESVRRVDLNTVTQAEMEQWKSGDTLLLNGKMLTGRDAAHKRIQSL
IESGEGLPEGVDFKGKFIYYVGPVDPVGDEVVGPAGPTTATRMDKFTDLMLDKTGLMGMI
GKAERGPATVESIKKHKSCYLMAVGGAAYLVSKAIKHSRVVAFEELGMEAIYEFDVKDMP
VTVAVDSEGVNAHETGPAIWKVKLEG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaagaagtccctgtaatcaagcaagccgatctcattgaaagcgttgctgatgcc
ctacaatatatctcttattatcacccaaaagactttgttgattctatggctgaagcctat
gaacgcgaacaaagctctgcagcaaaagacgcgattgcacaaattcttatcaattctcgt
atgtcagccgaaggtaaacgtccactttgccaagataccggtattgtgacctgtttcgtt
aagattggtatgggcgtgcaatgggataagacagatctaaccgttcaagagatggttgat
gaaggcgtacgccgtgcttataccaatccagataatcctcttcgtgcatcgattgtcgcc
gatcctgctggcggccgtaaaaacaccaaagacaacacgccgtcagttgtgcatgttgag
atggttcctggtaaccatgttgacgtggcgattgcagctaagggcggtggatctgaaaac
aaatctaagatggttatgcttaacccatcagatgatattgcagcttgggttgagaaaacg
cttcctactatgggcgcgggttggtgcccaccaggaatgcttggtataggtattggcggt
accgccgaaaaagcggcggtaatggctaaagagtcgctgatggatcctgtcgatattcat
gagcttcaagctcgcggcgcccaaactaccgatgaaaagttacgcctagaaatttttgag
cgtgctaataagctaggtattggcgcgcaaggcttaggtggtgtaacgactgtactggat
atcaagattaagtcagcccctacacatgcggcctctaagcctgtagtgatgatcccaaat
tgtgccgcgactcgtcacgtgcattttcacctagatggcaccggtcccgcgcttctaacg
cctccatcattggaagactggcctgaaattacttgggaagtcggggagagtgtgcgccgt
gtcgatcttaacactgtgacccaagccgaaatggagcagtggaagagtggtgacaccttg
ttgcttaatggcaagatgctgaccggtcgtgacgcggctcataagcgtattcaaagttta
attgagagcggagaaggcttaccagaaggtgtcgactttaaaggcaagtttatctactac
gtcggtcctgtcgatccagtcggtgatgaagtggtgggtcctgctggcccgactacggca
acccggatggataagtttaccgatctaatgctagataaaacaggtttgatgggcatgatc
ggtaaagctgagcgtggtcctgctaccgtggaatcaatcaagaaacataagtcttgttac
ttgatggccgttggcggcgctgcgtacctagtttctaaggcgattaagcactctcgcgtt
gtcgcttttgaggaactcggtatggaagctatctatgagttcgacgttaaggatatgcct
gttactgtcgctgtagactcagaaggcgttaatgcccatgaaacgggtccagcaatctgg
aaagttaagctagaaggctaa
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