Shewanella pealeana: Spea_2067
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Entry
Spea_2067 CDS
T00606
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spl03032
]
Spea_2067
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_2067
Enzymes [BR:
spl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Spea_2067
DNA replication proteins [BR:
spl03032
]
Prokaryotic type
DNA Topoisomerases
Spea_2067
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Spea_2067
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABV87387
UniProt:
A8H4A0
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Position
2503066..2505777
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AA seq
903 aa
AA seq
DB search
MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRLAQPFSMRYPLIDGQGNFGSVDGDAAAAM
RYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPAVLPTRIPTLLVNGSSGIAVGMAT
NIPPHNLNEVISGCLALIEDPALSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA
VMRARAEIEEENGRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGMR
IVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREVV
TRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPAEAKVKLVAEGWELGHVKG
MLEKAGDDAARPEWLEPEFGIRDDKYYLTEQQAQAILELRLHRLTGLEHDKIIAEYEELL
EIIAALLFILGSPERLMEVIKEELEEVLTNFGDERRTVINANEVDMSLEDLINEEDVVVT
LSHLGYAKYQVLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYWL
KVYQLPLASRTARGRPIVNLLPLAEGERITAILPVREYAEDKYIIMATSHGTVKKTALTA
YSNPRVNGIIAVNLKDGDQLIGVDITDGNDDIMLFSNEGKVVRFNEKARSSETGEVKIDP
ETGEEVIALRAMGRTATGVRGIKLEDGQTVVSLIVPKGEGDILTVTENGYGKRTDLAEYP
AKSRGTKGVVSIKVSERNGAVVGAVQVGENDEIMLISNKGTLVRTPATGVSSIGRNTQGV
TIIRTAEDEKVVGLQRIDEIQVPDVELDEEGNPIIVEGAAGTEVQAEAVNTEAEVTETPK
IED
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctataacaccaattaatattgaagacgaattaaaaaattca
tacttagattacgccatgagcgtaatcgttggccgtgcactgcctgacgttcgtgacggt
ttaaaaccggtacatcgccgcgtacttttcgccatgagcgaattgaaaaacgactggaac
aagccttataaaaagtctgcccgtgtcgttggtgacgtaatcggtaagtatcacccgcat
ggtgataccgctgtatatgacacaatcgttcgtttggctcagcctttctctatgcgttac
ccacttattgacggtcaaggtaacttcggttctgtcgatggcgacgccgcagctgcaatg
cgttataccgaaatccgtatggacaaggtggcacatcagcttttagccgaccttgagaaa
gagaccgttgacttcgttccaaactacgatggcaccgagtttattcctgccgttctacca
acacgcattccaacactactagtgaatggttcgtcaggtattgcggttggtatggctaca
aacattccgccacataacttgaatgaagttatcagcggttgtttagcactaatcgaagac
cctgcattatctatcgaacaattgatggaatacattccaggtcctgacttcccaactgca
gcgattattaatggccgtaaaggcattatcgatgcgtataaaaccggccgtggccgtgcg
gttatgcgtgctcgtgcagagatcgaagaagagaatggccgcgagcgaattatcgttcac
gaaattccatatcaggttaacaaagcgcgtttgattgaaaaaattgccgagctagttaaa
gataagaagatcgaaggtattagtggtctacgcgacgagtctgataaagacggcatgcgt
attgttatcgagatcaagcgtggtgaagtgggcgaggttgttctaaataacctttacgca
caaactcaaatgcagtgctcttttggtattaacatggttgctctgaccaatggtcagcca
aaactatttaatttaaaagagatgctagagtgctttattcttcaccgtcgtgaagtggtt
actcgtcgtaccgtatttgaattacgtaaagcacgtgaacgcgcgcatattcttgaagcg
ttagcggtggcgcttgcaaacatcgacccaattatcgccttgattaaggcatctccgact
ccagccgaagcgaaagtgaagctagttgcagaaggttgggaacttggccacgttaaaggc
atgcttgaaaaagcaggcgatgacgcagcccgtcctgagtggctagagcctgaatttggt
attcgcgacgataagtactatctgactgagcaacaagctcaagcgatccttgaactacgt
ttacaccgtttaaccggtctagaacatgacaagatcattgctgaatacgaagaactacta
gaaatcatcgcggcattactattcattcttggtagcccagagcgtttgatggaagtgatt
aaagaagaacttgaagaagttctgacaaactttggtgacgagcgccgtactgttattaac
gctaacgaagttgatatgagtctagaagatcttatcaatgaagaagacgttgtagttaca
ctgtcgcaccttggttatgccaagtaccaagttctatctgattatcaggctcaacgccgt
ggtggtaagggtaaagctgcaactaaagtgaaagacgaagatttcgttgaaaaactattg
gtagctaacactcatgacaccatcttgtgcttctctgactttggtaagatgtactggctg
aaagtttaccaattgccattggcaagccgtacagcacgtggtcgcccaattgttaacttg
ttaccgttggcagaaggtgagcgtatcactgcgattctacctgttcgcgaatacgctgaa
gacaagtacatcattatggcgacgtctcacggtacagttaagaagactgcactaacggct
tatagcaacccacgtgtaaacggtattatcgctgtaaaccttaaagatggtgaccagttg
attggtgttgatattaccgatggtaatgacgatatcatgctgttctcgaatgaaggtaaa
gtggttcgctttaacgagaaagcccgtagctctgaaacaggtgaagtgaaaattgatcct
gaaacaggcgaagaagttatcgcactacgtgcgatgggacgtactgcaacgggtgttcgt
ggtattaagcttgaagatggccaaactgttgtatcgctaattgtacctaagggtgagggt
gatatcttaactgtgaccgagaacggttatggtaagcgtaccgatttagccgaatatcca
gctaagagccgtggtacgaaaggtgttgtctctatcaaagtgagcgaacgtaacggcgcc
gtagttggtgcagtacaagttggcgaaaatgatgagatcatgctgatcagtaacaagggt
actttagtacgtactccagctactggcgtatcaagcattggtcgtaacactcaaggtgtg
accattattcgtaccgctgaagatgagaaagttgttggtctacaacgtatcgatgaaatt
caagttcctgatgttgagcttgatgaagagggtaaccctatcatcgttgaaggcgctgca
ggaacagaagttcaagcagaagctgtcaataccgaagctgaagtgactgaaacaccaaaa
attgaagattaa
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