Shewanella pealeana: Spea_2402
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Entry
Spea_2402 CDS
T00606
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spl
Shewanella pealeana
Pathway
spl03030
DNA replication
spl03430
Mismatch repair
spl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spea_2402
03430 Mismatch repair
Spea_2402
03440 Homologous recombination
Spea_2402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spl03032
]
Spea_2402
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_2402
Enzymes [BR:
spl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spea_2402
DNA replication proteins [BR:
spl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spea_2402
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spea_2402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABV87722
UniProt:
A8H585
LinkDB
All DBs
Position
complement(2931483..2932211)
Genome browser
AA seq
242 aa
AA seq
DB search
MNIVSSAKRQIILDTETTGMNQSSGPIYLGHRIIEIGCVEVVNRRLTGRHYHEYINPQQP
IDEEAIAVHGITNEFVADKPKFHEVAQSFIEFIDGAEIVAHNANFDVSFMDHEFSMLQPL
GPKTADICQILDSLAIAKHLHPGQKNNLDALCKRYGIDNSARDLHGALLDAEILADVYLL
MTGGQTKFNLSSEKAGQEGGGIQRLSADRTKLKVIAASADELIRHEERLDLVAKSGQCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattgtttcaagtgccaagcggcaaattattctcgataccgaaaccacaggtatg
aaccaatcgagtggcccaatttatttaggccatcgaattattgaaattggttgtgtcgaa
gtggtgaaccgccgtttaacgggtcgtcattatcatgaatacattaatccgcaacagcct
atcgatgaagaggctatcgcggtccatggtattaccaatgagtttgttgcagacaagcca
aagttccatgaagtagcccaaagctttatcgagtttatcgatggggcagaaattgtggca
cataacgctaacttcgacgttagctttatggatcacgaattttcaatgttgcagccgcta
ggtccaaaaactgctgacatctgccaaatccttgattcgttagccatcgctaagcattta
catccaggccaaaagaacaacttggatgcactatgtaagcgctacggtatcgataactct
gcccgtgatcttcacggcgcattactcgatgctgagattttggctgacgtatacctgtta
atgacgggtggtcagactaaatttaacctttcaagcgaaaaagcaggacaagagggcggt
ggtatccaacgtttaagcgctgatagaacaaaacttaaagtgatcgccgcatcggccgat
gaactgattagacacgaagagcgattagacttagtcgcaaaatcaggacaatgcctctgg
cgcggataa
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