Shewanella pealeana: Spea_2407
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Entry
Spea_2407 CDS
T00606
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spl01011
]
Spea_2407
Enzymes [BR:
spl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Spea_2407
Peptidoglycan biosynthesis and degradation proteins [BR:
spl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Spea_2407
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
Sda
Motif
Other DBs
NCBI-ProteinID:
ABV87727
UniProt:
A8H590
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All DBs
Position
2935508..2937067
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AA seq
519 aa
AA seq
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MRVPFLFVAGGIALLTGCQTLDNQQTSEGIPAKPVAVEKVAPKPIEPEIVEVVEVTDIWQ
RIRLNMQMEVPDEKLVRQYRDWYIKHPQHLERVSERATPFMYLIVDEIEKRNLPIELALL
PIVESAFDPFAYSHGAASGLWQFTSPMARHFGLQMNWWYDGRRDVPAATIAALDMLEYLH
GKTGQNWLYAIAAYNTGEGRVINAAKRNKKKGLSTDFFSLNLPRETERYVPQLLALADVI
KNADKYGIKLTPISNEPQIEVINIGSQIDLALAADIANMTTSELHKLNPGFNRWATAPDG
PHKLVLPVDKADAFKLALNDTSTTDRLNWERYKIESGDSLGLIAKRYRTTISALKAVNDI
NGNTIVAGKYLLIPVAAKNLDEYLLSADQRLARQQNKARGASKITYKVRSGDSLWKIAKQ
HKVKTAQLASWNSMAPKDPLQIGQKLVIWSGTVSNKSGLSEVMRTVNYKVRNGDSLARIA
NKFNVSVSDLVRWNSLEKSKYIQPGQMLKLYVDMTKVRT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtaccatttttatttgtcgcagggggtattgctctgttgacaggttgtcaaact
ttagacaaccaacagacttcggaagggatccctgccaagccagttgcagttgagaaagtc
gcccctaagcctattgagccagagattgttgaggtcgttgaagtcaccgatatttggcaa
cgaattcgtctcaatatgcagatggaagtccccgatgaaaaactcgttcgccaatatcgc
gactggtatataaaacatcctcaacatttagagcgcgtatctgagcgagcgacgccattt
atgtatctgattgtagatgagatcgagaagcgtaatctaccaatcgagttggctctgcta
cccattgttgagagtgctttcgatccttttgcctactcacatggtgcagcatcaggcctt
tggcaattcacttcgccaatggcacgtcacttcggcctacagatgaactggtggtatgac
ggtcgcagagatgtccccgccgccacgattgccgctttagatatgcttgagtaccttcat
ggtaaaacggggcaaaattggttatatgccattgccgcctacaatacaggtgaaggacgc
gtgattaacgcggctaagcgcaacaagaaaaaaggattatcgactgatttctttagttta
aatcttccaagagaaactgagcgctatgttcctcagttacttgcgttagccgacgtgatc
aaaaatgccgataaatatggcattaaactgacccccatcagcaatgagccacaaattgaa
gtcatcaatattggtagtcaaatcgatttagcgcttgccgctgacattgccaatatgacc
acatcagagctacacaagttaaacccaggttttaaccgttgggccacggctcctgatggg
ccacacaaacttgtattgcccgttgataaagccgatgcctttaaactggcattaaatgac
actagcacaaccgatcgcctcaactgggaacgctataagattgagtcaggcgacagctta
ggattaatcgcaaaacgttaccgcactacgatttcggcattgaaggcagtcaatgatatc
aatggcaacaccattgttgccggaaagtacctgttgatccccgttgcagcgaagaacctt
gatgaatacctgttgtcagccgatcaacgtctagcgcgtcaacaaaataaagcccgtggt
gccagtaaaattacctataaggtcagatccggtgattctctgtggaaaattgccaagcag
cacaaggtgaaaacggcccaacttgccagctggaatagcatggcacctaaagatccgctg
cagattggccagaagctcgtcatctggtctggtaccgtatctaacaagagtggcttaagc
gaagtgatgcgtaccgtaaattataaggtccgtaatggtgactctttggctcgcatcgcc
aataagttcaatgtcagcgttagcgacctcgttcgttggaactcactcgaaaagagcaag
tatattcaacccggtcaaatgcttaagctgtatgttgatatgacaaaagtcagaacataa
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