Shewanella pealeana: Spea_2559
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Entry
Spea_2559 CDS
T00606
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_2559
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Spea_2559
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
Zn_ribbon_3
AAA
AAA_16
SLFN-g3_helicase
zf-tcix
DZR
Zot
AAA_22
T1R_D3-like
ChrB_N
Motif
Other DBs
NCBI-ProteinID:
ABV87879
UniProt:
A8H5P2
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All DBs
Position
3116131..3117873
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AA seq
580 aa
AA seq
DB search
MQLRDYQQQSVDAAINHFKSSSDSALLVLPTGAGKSIVIAELARIAKGRVLILTHVKELV
AQNAEKVGLLTTKAKIYSAGLKQKSTAGKTVVASIQSAVKQPTQFDEPYSLVIIDECHRV
SPDKDSQYQQLLTHLKSKNSRIRLLGLTATPYRLDLGWIYRHHYHGKIGNTEKPVFEKCI
FELPMRPLIKRGFLSQPKMFDGLSAQYDFSELTASPTGEYNEKEVNSILNHCGRATTAIV
KQLIALGAHRQGIIIFAATVKHAEEIVAKLEGETVALITAKTSREDRDSLIGAFKAKKIK
YLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRIDKNKDECLVIDYAANGYD
LFYPEVGQPKPNSKCKPVQVHCPVCDFANIFWGLTDNDGDIIEHFGRRCQALIEREGRKQ
QCDFRFRSKSCPNCGEENDIAAKVCQHCQFVLVDPDKRLKEVLQQKHHHLFKCQSMVLEP
QEERLVVRYIDLDGNDFCRYFKMQTPAQIRAVFALFIFPHSRTPGIKHKKYQTPQQLADD
ANLFRKPDLLLLKKGKKGWELMETIFDYKGRYQTEKTHFE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactgagagattatcagcagcaatccgttgacgccgccatcaaccatttcaaatct
agttctgactcagctttactagtgctgccaaccggagcaggtaagagcattgtcattgcc
gagttagctcgaatagccaaggggcgagtactcattctcacccacgttaaggaactcgtt
gctcaaaatgccgagaaagtcggtttactgaccactaaagcaaagatctattcggctgga
ttaaagcaaaaatcaactgccggtaagaccgttgtcgccagtatccaatcagcagtgaaa
caaccaactcaatttgatgagccttacagcttggtcattatcgatgaatgccatcgcgtt
agcccagataaagacagccaatatcagcaactgttaactcatttaaagtctaaaaatagt
cgcattagattactggggttaacagcgaccccctatcgtttagatttgggttggatttat
cgtcatcactatcacggcaagattggcaatactgaaaaacccgtatttgaaaaatgtatc
ttcgaactgcctatgcgtccactcatcaagagaggtttcttaagccagccaaaaatgttt
gatgggctcagtgcgcaatacgactttagtgagttaacggcctcgccaactggtgaatac
aatgaaaaagaagtgaactcaatactcaatcattgtggccgagcaacaacggctatcgtt
aaacaattaattgcactaggagcacaccgtcaggggatcattattttcgcggcaacggtc
aaacacgccgaagaaattgtagctaagcttgaaggtgaaactgttgcactgatcaccgcg
aagacatcacgagaagatagggactcgttaatcggcgcgttcaaagcaaagaagatcaag
tacctcgtcaatgttgcagtattaacaacaggctttgatgccccccacgttgatcttatt
gctatattgcgccctaccgcctctgttagcctttttcaacaaatggttggccgagggctc
agaatcgataaaaataaagatgagtgccttgtcattgattatgcggccaatggatacgac
ctattttatcctgaagtcggacaacctaaacccaatagcaaatgcaaacctgtacaggtt
cattgtccggtatgcgattttgccaatatcttttggggcttaaccgataatgatggcgac
attattgaacattttggccgcaggtgtcaggcgctaatagaaagagagggacgtaaacag
caatgcgattttcgattccgctctaagtcttgtccaaactgcggggaagaaaatgatatt
gcagctaaagtctgccaacattgtcagttcgttttagtcgatccagataaaaggcttaaa
gaagttctgcagcaaaaacatcaccacctgtttaaatgccaaagcatggttctagaaccg
caagaagaacgcttagtggtccgctatattgacctcgatggtaatgacttctgccgttac
tttaaaatgcaaactccggcacagatccgagcagtatttgcgttgtttattttccctcat
agccgaacgccaggtataaaacataaaaaataccaaacaccacagcaactagctgatgat
gcaaacttgtttagaaagcctgatctgctattactcaaaaaaggcaaaaaaggctgggag
ctgatggaaacaatttttgattacaaaggccgatatcaaaccgagaaaacacatttcgag
taa
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