Shewanella pealeana: Spea_2633
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Entry
Spea_2633 CDS
T00606
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_2633
DNA repair and recombination proteins [BR:
spl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Spea_2633
Archaeal homologous recombinant proteins
Spea_2633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
IFT57
nSTAND_NTPase5
cobW
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABV87953
UniProt:
A8H5W6
LinkDB
All DBs
Position
complement(3204371..3207427)
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLTLEMSAFGPFASTQITDFSALGSNPLFLINGPTGAGKTTLLDGICFALYGKTTGDE
REGSQMRCDLAADSLLTEVTFSFALGDKQYRIRRVPEQQRAKKSGDGYTVQKPEAQLYRI
DSDGSEHLLVASKVSEATAEIESLTGLDADQFRQVMVLPQGKFRELLMADSKDREKIFSQ
LFQTQIYRKIEDKLKFQASAIKAEVRDHRNKRDGMLANISLESDDELTQELTELEPELNA
AAALKQQSQQALIEANKQFESAKTLTNDFEALDKLKQTAVLLDDKKKAITQQQVRLESGQ
KALQLKPVLDVSLARDAEVAQAQGACVNAQAAKEHSSQALSLSQAQFEALPEQEQKLQHA
QSELQQLSKLEPQLKGLDALQNNVNQACLQLEQAKEKGINEKGQLDALQVQKQQAEQQLP
QLEQFAAEQVNAQQALSAQTDLIERYQLWQQASIDASHTEQALTLAKEKGGQLRTRFNEA
QTQHRQLQLIWHRGQAASLALQLSPGSPCPVCGSGEHPNPAQSAEQLPTEEQLQQALQAE
ESANESLNQARAEYSSLNTKHQEQLKRAAELLQKIGDASQQTFENLQSDLLQRQQQLKQA
NAAAEQLTQLRGQLQQWQTKERALQTQLDSEREHFSEQQSLLAELQGQFKHASTAIPEQY
RSLDALNAAIEQVNGQIAAMQQVINSTRQNHSQAAELDASNSSALTAAQSSLTQAKERSE
KALTELTTQLLSAGFSDQQALAQALLSNDELKAISEEISHYQQACTANDTRLTELHEKLA
ERVKPELDTLVAELNALQTQQQAAENTWQTLQTRVTQLSQTQKLLKEADAKAKKLEDEYG
VIGTLSEVANGQTGNKISLQRFVLSVLLDDVLLEASHRLQLMSKGRYRLLRKEERAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLDLAIRTLMDLQSSGRMIGVISHVSEMKEQIGTRIDINKTAVGSEVSIVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgcttactctagaaatgtctgcgttcggcccatttgcatcgacgcaaataacc
gacttttcagcgctaggctctaatccgctgtttttgatcaacggcccaaccggagcgggt
aaaaccacgctattagatggcatctgttttgcgctatatggcaagaccacgggcgatgag
cgtgaaggcagccagatgcgctgtgacttagccgctgacagcctactcaccgaagtgacc
ttcagttttgcactgggcgataagcagtaccgtattcgacgggtaccagagcagcagcga
gctaaaaagagtggcgatggttatacggtgcaaaaaccagaagcgcagctataccgtatc
gatagcgatggcagcgagcacttgctggtggcgagtaaagtttcagaggccacagctgaa
atagagagcctgacaggccttgatgcggatcagtttcgtcaggtgatggtgctgccacag
ggcaagttccgcgaactattaatggcggactcaaaagacagagagaagatttttagtcag
ctatttcagacgcaaatctatcgtaaaattgaagacaaattaaagttccaagcatctgca
attaaggcggaagtgcgcgatcaccgtaacaagcgtgacggcatgttagccaacattagt
cttgaatcggatgatgaactgacacaagagctcacagagcttgagcctgagcttaacgct
gcagcggcattaaaacagcaaagccagcaggcgctgattgaggccaacaagcagtttgag
tcggctaagacattaactaatgactttgaggcgttagataagcttaagcaaaccgctgta
ttactagatgataaaaagaaagccatcacccagcagcaagtaagacttgagagcggccaa
aaagcactgcaacttaaacctgtgcttgatgtgtcacttgcccgtgacgcagaagtggca
caggcccaaggcgcatgcgttaatgcacaagcggcgaaagagcatagctcacaagcgtta
tcgcttagccaggctcaatttgaagcgctacctgagcaagagcaaaagctgcaacatgca
caaagtgagctacagcaattaagcaaattagaacctcagctaaaagggctcgacgcgctt
caaaataacgttaatcaagcttgcttgcagctagagcaagccaaagagaaaggcattaac
gagaaaggccagttagatgcgctgcaagtgcaaaaacaacaagccgagcagcagttacca
caattagagcaatttgcagctgagcaagttaatgcccaacaagcattgagcgcccaaacc
gatttgatagagcgttatcagctttggcaacaagcgagtatcgatgcgagccataccgag
caggctttaacactggcaaaagagaagggcggccagttacgcacccgctttaatgaggcg
caaactcagcatcgacagttacagcttatttggcatcggggccaagcggccagtttagcc
ttacagctaagcccaggttcgccatgcccggtatgcggcagcggtgaacatccaaaccct
gcacaaagcgctgagcaattaccaacagaagagcagctgcaacaagcactgcaagctgaa
gagtcggctaatgagtcgctaaaccaagcgcgggcggaatactcaagccttaatactaag
catcaagagcagttaaagcgcgcggctgagctattgcaaaaaattggtgatgccagtcag
caaacatttgaaaaccttcaatcagacttgttgcaacgacaacaacagcttaagcaggcg
aatgctgctgccgagcaattaactcagttaagagggcaactgcaacagtggcaaactaaa
gaaagagcgctacaaactcaactcgatagtgagcgagagcatttttctgaacaacaaagc
ttgctggcggagctgcaaggtcagtttaagcatgcatcaacggccattcctgagcaatat
cgtagccttgatgccttaaatgctgcaattgagcaagttaatgggcaaattgcagctatg
cagcaagtgattaattcgacccgccaaaaccatagtcaggcagccgaattagacgcgtct
aactcttcggccttaactgctgcgcagtcgagtctgacgcaagcgaaagagcgcagtgaa
aaagcgttaacggaattaacgactcaactgttaagtgcaggctttagtgatcagcaagcc
ctcgctcaggccttgttatctaatgacgaacttaaagcgataagcgaagagattagtcac
tatcagcaagcgtgcactgcaaatgacaccagattgaccgaactacatgaaaagttagca
gagcgagtgaaacctgagctagatacgctcgtagccgagcttaatgctcttcaaacacag
cagcaagcggctgaaaatacatggcaaactctgcagactcgagtcactcaattaagccaa
acccaaaagctgcttaaagaggccgatgctaaagccaagaaactcgaagatgagtatggc
gtgatagggaccctatctgaggtcgccaatggtcaaacgggcaataaaatcagcttacag
cgttttgtgcttagtgtgctgcttgatgacgtattgcttgaggcgagtcatcgtctgcaa
ttgatgagtaaaggccgctatcgtttgttacgtaaagaagagcgagctaagggtaacaag
gcgtcagggcttgagttagaagttgaagatgcctacacctctaaggtgcgcccagttgcg
acactcagtggtggtgaaagctttatggcggccctgtctatggcactaggtttatccgat
gtggtgcaggcttatgctggtggtattaagctcgacacgctatttattgatgagggtttt
ggcagtttagatcaagactcactcgatctcgctattcggaccttgatggatctgcaatct
tccggtcgtatgatcggggtgatctcccatgtgtcagagatgaaggagcagataggaacc
cgtatcgatatcaataagaccgcagtggggagtgaggtgagcatagtactgccttaa
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