Shewanella pealeana: Spea_3058
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Entry
Spea_3058 CDS
T00606
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spl03016
]
Spea_3058
Enzymes [BR:
spl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Spea_3058
Transfer RNA biogenesis [BR:
spl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Spea_3058
Prokaryotic type
Spea_3058
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ABV88375
UniProt:
A8H738
LinkDB
All DBs
Position
complement(3751683..3752630)
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AA seq
315 aa
AA seq
DB search
MARRSRGRFIDGIVLLDKDTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGEIVQTREVNFTQEQLDTALEYFRGETMQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPINVFELNFISLEGDELTLDIHCSKGTYIR
TITDDLGEMLGCGAHVIMLRRTQVAGYPYDKMVSLKQLEELVAKADAESLTLSEVLDPLL
LPMDTAVSGFKEINVSDELATYLMNGNPVQVANLPVDELVRITIGDARQFVGIGQMNDDG
LLAPKRLIVLREPQD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgttctcgcggtcgttttatcgacggtattgtactgttagataaagacact
ggcatgagctctaactttgcattacaaagagtgaaacgcttctttaatgcaaataaagcg
ggtcataccggtgcactggatccgctagcaacgggcatgttacctatttgcttaggtgag
gcgactaagttttcgcagcacttactcgacgcggacaaacgctacttagtaacggcaaag
cttggacaacgtactgatacaagtgactctgatggtgaaattgttcaaacgagagaagtt
aacttcactcaagagcagttagatactgcgctggaatattttcgcggtgagacgatgcaa
gtcccgtcaatgtattcagcactaaagtaccaaggtcagcctttgtataagtacgctcgt
gagggaattgaagttcctcgtgaggcacgccctatcaatgtgtttgagttgaactttatt
agccttgaaggtgatgagttaaccttagacattcattgttctaaaggtacctatatccgt
actatcacagatgatttaggcgagatgttaggctgtggcgcacacgttatcatgctacgt
cgcacacaagttgctggctacccctatgataaaatggtgtcattgaaacaacttgaagag
ttagtggctaaggctgatgccgagtccttgactctatctgaggtattggacccattactg
ttacctatggatactgcggtaagtggtttcaaagagataaatgtctctgatgaacttgct
acttacctgatgaatggtaaccctgtgcaggtggctaatttgcctgtcgatgagttagtg
cgtatcacgattggcgatgctcgtcagtttgttggtatcggacaaatgaacgatgatggt
ctgcttgctcccaagcgactcatcgtattaagagagccacaagactaa
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