Shewanella pealeana: Spea_3061
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Entry
Spea_3061 CDS
T00606
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spl03021
]
Spea_3061
03009 Ribosome biogenesis [BR:
spl03009
]
Spea_3061
Transcription machinery [BR:
spl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Spea_3061
Ribosome biogenesis [BR:
spl03009
]
Prokaryotic type
rRNA transcription factors
Spea_3061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
DUF2187
KH_KhpA-B
KH_2
Glyoxalase_4
Motif
Other DBs
NCBI-ProteinID:
ABV88378
UniProt:
A8H741
LinkDB
All DBs
Position
complement(3755843..3757342)
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKGVPREKIFEALEIALATATKKKYEGDIEVRVAIDRKTGAYETFR
RWMVVEDAGVPLENPFREITLEAAKYDDPEIELGGYIEDEIESVAFDRITTQTAKQVIVQ
KVREAERAQIVDQFRDREGELIVGVVKKSNRESVVVDLGTNADGVLFKEDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKPDMLIELFRVEVPEIQDEMIEIMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINCMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNIRLATQLSGWELNVMTVADMKAKHQAESAKVV
NLFIQALDVDEEFAQLLSDEGFTSLEEIAYVPASELLEIDGFDEDIVESLRERAKAAIST
RALATEEALDGAEPSEDLLALEGLDRHLAFVMASKGVITLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagattctgctagtcgctgaggcggtttcaaatgagaaaggtgtaccgcgc
gaaaagatttttgaagcgctggaaattgcactagccacagcaaccaagaaaaaatacgaa
ggtgacatcgaagttcgtgtcgcaatcgaccgtaagactggtgcatacgaaactttccgt
cgttggatggtagttgaagatgctggcgtaccattggaaaacccattccgtgaaattacg
cttgaagctgctaaatatgacgatccagaaattgagttgggtggttacatcgaagatgaa
atcgagtcggttgcattcgaccgtattactactcaaacagctaagcaagttatcgtacaa
aaagtacgtgaagctgagcgtgctcaaattgtagatcagttccgcgaccgcgaaggtgag
ttgattgttggcgtagtcaagaagagcaaccgcgagagcgttgttgttgatcttggtact
aacgcagacggcgtactgttcaaagaagatttaatttcacgtgaatcgttccgtccaggc
gaccgtgttcgtgcattgctttattcggtacgtccagaagctcgcggcgcacagttattc
ttgactcgtactaaaccagatatgcttattgagctattccgtgttgaagtaccagaaatt
caagatgagatgatcgaaatcatgggcgctgctcgtgatccaggttctcgcgctaagatt
gcggttaagtctaacgaccgtcgcatcgatcctatcggtgcatgtgttggtatgcgtggc
gcacgtgttcaagctgtctctaacgagcttggcggtgagcgtgttgatatcgtgctttgg
gatgataacccagcgcaatacgttattaactgtatggcaccagctgatgtggcatctatc
atcgttgatgaagacaaccactcaatggatatcgccgttgaagcagacagcttagcgcaa
gcgattggccgtaacggtcaaaatattcgtctagcaactcaactatctggttgggagcta
aacgtgatgacagtagctgacatgaaagctaagcatcaagctgaaagcgctaaggtagtg
aacttgttcattcaagcgctcgacgttgatgaagagtttgcacaactactttctgatgaa
ggtttcacgtctctagaagagattgcctacgtaccagcatcagaattactagaaattgat
ggattcgacgaagatatcgttgaatcattaagagagcgcgcaaaagcggcgatctctact
cgtgctcttgcgactgaagaggcactagatggtgctgaaccaagtgaagatcttcttgcg
ttagaaggtttggatagacacttggcattcgtaatggcaagcaaaggcgtaattacgctt
gaagatttagccgaacaaggcattgatgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgagcttattatggctgcccgtaatatctgttggtttggcgaagaagcataa
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