Shewanella pealeana: Spea_3214
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Entry
Spea_3214 CDS
T00606
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spl03009
]
Spea_3214
Enzymes [BR:
spl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Spea_3214
Ribosome biogenesis [BR:
spl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Spea_3214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ABV88530
UniProt:
A8H7J3
LinkDB
All DBs
Position
complement(3940661..3941380)
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AA seq
239 aa
AA seq
DB search
MRLDKFICKSTELNRKHASDCIERAEVSVNGEVITDVRFQVHESNEVRYKGQRLVARPSR
YIMLHKPIHTLSSNVDGDYPSLFRCIDIDRVEDLHIVGRLDADTTGLVLLTDDGRWSFDI
IRPDKQCAKTYRVMLRDPIAGDVAADVIARFEAGLQLQNEQALTLPAKLEIVAPREVLLT
ITEGKYHQVKRMFAAVGNRVIGLHREQIGDLSLDLKVGEWRYLSDTEVKRLSTPTPSGD
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaatttatctgtaagagtaccgagcttaatcgcaagcacgctagcgat
tgtatcgagcgcgcggaagtgagcgttaacggcgaggtcattactgatgtgcgctttcag
gtacatgaaagtaacgaggtgcgctataaggggcaaaggttagttgcgaggccgtcgcgc
tacatcatgctgcataagccgatacataccttaagctcaaatgtcgatggtgattaccca
agcctatttcgctgtatcgatattgacagggttgaggatttacatattgtgggtaggctc
gatgccgacaccacgggcttagtgttactgaccgatgatggtcgctggtcattcgatatt
attcgccccgacaaacagtgtgcaaaaacctaccgggtgatgctcagagatcccattgct
ggagatgtagcagccgatgttatcgcaaggtttgaggctggcctacaactgcaaaatgag
caggcgttaaccctacctgcgaaacttgagattgttgcgcctagagaggtgttactcacc
atcaccgagggcaagtatcaccaggtaaagcgtatgtttgccgcggtgggcaatcgcgtt
atcggtttacacagagaacaaattggtgatttaagcttagatttaaaggtcggtgagtgg
cgttatctttctgataccgaggtgaagcgattgtcgactcctacgcctagcggtgactga
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integrated database retrieval system
