Shewanella pealeana: Spea_3253
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Entry
Spea_3253 CDS
T00606
Name
(GenBank) protein of unknown function DUF181
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spl03009
]
Spea_3253
Ribosome biogenesis [BR:
spl03009
]
Prokaryotic type
ribosomal protein modification factors
Spea_3253
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
ABV88569
UniProt:
A8H7N2
LinkDB
All DBs
Position
complement(3990520..3992706)
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AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDIPTENIRLSQNNIVDPEDRYNQIFQIQVELPDDISDKDRQGILRSIERCTVKKVVQT
GPEFKIETVENLDADANAMLMGQSDSDASTYILGKDLPLEQTIANMTGMLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELEDDDSLPAGMLDDYCLAIYNPEGELGGSNLIDTNSGNIDRGIC
TIPYTRHSDGETVYFPSNLIENLFLSNGMSAGNNLQEAQVQCLSEIFERAVKRQIIEQEI
VLPDVPMQVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFVEWDFSGTNQEEADGLFGILETLGKEVYTADFDQLGASACRMLVPGFSEVY
LVDDLIWDNTNKALDYREDILNLHSLSDDELVDLVNRLEESQLDNYTDIRTMIGIVFDEN
TVWGQLTIIELKILIYLALGAAEEAMELVGDFLQYNDNTVERGLFYQAVNAVLEVEMDEE
LELEHFIHSFNRMFGEEVMDNVIGTVSGEVRFFGLTKTSMALEGIEPHLRLIESYKKLHS
ARAKAAAK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaactttctcgacaacttgagactcgaagccaagttcgacgacttt
accgtcaccgccgaccagccaatccgctataaaggcgatggctcagcaccgagcccattt
gattatttcttagcatcatcagctttgtgtgcggcttactttatcaaggtgtactgcaag
gctcgcgatattccgactgaaaacattcgcttgtcgcagaacaacatagtcgaccctgaa
gatcgctataaccagatcttccaaattcaagttgagctaccagacgatatttcggataaa
gaccgtcaagggattttgcgctcgattgaacgttgtaccgtgaaaaaagtggtacaaacc
ggaccagaatttaagattgaaaccgttgaaaacctagatgccgacgctaacgccatgttg
atgggccaaagcgatagcgatgcgagcacttacatcttaggtaaagacctgccgcttgag
caaaccattgccaacatgacggggatgcttgctgatttaggcatgaagattgagatctct
tcttggcgcaatatcgtgccaaacgtatggtcgctgcatatccgtgatgcggcgtcacct
atgtgctttaccaatggtaaaggcgcgactaaagagagcgcactttgctcggcattaggc
gagtttattgagcgtctaaactgcaacttcttctacaatgaccaattcttcggtgaagag
attgctaacagcgaatttgtgcattacccgaacgagaaatggttcgagttagaagatgat
gactcattgcctgctggcatgctcgatgattactgtctagctatctacaacccagaaggt
gagctaggtggttcgaaccttatcgataccaactcgggtaatatcgaccgcggcatctgt
actattccatacacgcgtcactcagatggcgaaaccgtgtatttcccatcgaacttgatt
gaaaacttgtttctaagtaacggcatgagcgcgggtaacaacctgcaagaagctcaggtt
cagtgtctgtccgaaatttttgagcgtgcggttaagcgtcaaatcatcgagcaagaaatt
gtactgccagatgtaccgatgcaagtgctagagaagtacccaagcattcttgcaggcatc
aatggtctagaagagcagggcttcccagttgtggttaaagacgcgtcactgggtggtcag
ttccctgtgatgtgcgtgaccttgatgaaccctaaaaccggtggtgtatttgcctcattc
ggcgcgcacccaagctttgaagtcgcactggagcgtagcttaactgagctactacagggc
cgtagcttcgaaggcttaaacgatgtacctaagcctacgttcaacagcatggcggtaact
gagcctgaaaacttcgtcgagcactttatcgactcgacgggtgtgatctcatggcgcttc
tttagcagcaagcatgattatgagtttgttgagtgggacttctctggtactaaccaagag
gaagcagatggcttattcggcatcttagaaaccttaggcaaagaggtgtacacagctgat
tttgaccagcttggcgcatcggcttgtcgtatgctggtaccgggtttctctgaagtttac
ctagtggatgacttgatttgggataacaccaacaaggcgctagattaccgtgaagatatc
ttaaacctacactcactgtctgatgatgagctggtggacttggttaatcgtctagaagag
agccagctcgataactacaccgacattcgcaccatgataggtatcgtcttcgatgaaaat
accgtttggggtcagctaaccattattgagcttaagatcttaatctatctagcacttggc
gcggcagaggaagcgatggagctagtgggggatttcctacagtataacgacaacacggtt
gagcgcggcctgttttatcaagcagtcaatgcagtacttgaagttgaaatggacgaagag
ctagagcttgagcactttatccatagcttcaatcgtatgtttggcgaagaagtcatggat
aacgttatcggcactgttagtggtgaagtgcgtttcttcggcctaaccaagaccagcatg
gcgcttgaaggcatcgagccacacctacgcttgattgaaagctacaagaagttacatagc
gcacgcgctaaggcggcagctaagtaa
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