Shewanella pealeana: Spea_3314
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Entry
Spea_3314 CDS
T00606
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spl
Shewanella pealeana
Pathway
spl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Spea_3314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spl03400
]
Spea_3314
Enzymes [BR:
spl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Spea_3314
DNA repair and recombination proteins [BR:
spl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Spea_3314
Prokaryotic type
Spea_3314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABV88629
UniProt:
A8H7U2
LinkDB
All DBs
Position
complement(4056093..4056761)
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AA seq
222 aa
AA seq
DB search
MTAHSSWSSFINEQQQQDYFQSLQLFVEAERAAGKVIYPPESEVLAAFDSTPLDKVRVVL
IGQDPYHGPGQAHGLCFSVKHGVKTPPSLVNMYKELATDIDGFSIPEHGNLSHWAEQGIL
MLNTVLTVEQGKAHSHAKSGWETFTANALELLNQQAQPIIFVLWGAHAIKKGKVINAPQH
QVISGPHPSPLSAYRGFFGCQHFSKINAILQARGEVPIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcactctagctggtcatcgtttataaacgaacagcagcaacaagactatttc
caatccttacagctgtttgttgaagccgaacgcgcagcgggcaaggttatttatccgcct
gagagcgaagtgctggccgcatttgactcgacgccattggataaggtacgcgtggtgcta
atagggcaagacccttatcatggtcccgggcaggcacatggcttgtgtttctcagttaaa
cacggagttaagacgccgccgtccttggtgaatatgtataaagagctggcaacagatatt
gatggtttcagtattccagagcatggcaacctgagtcactgggccgagcagggaatattg
atgctcaataccgtgttaaccgtcgagcagggcaaggcgcactcccacgctaaatcgggt
tgggaaacttttactgccaatgcgcttgagttactgaatcaacaagctcaaccgataatc
tttgtgctttggggcgctcacgccattaaaaagggtaaagtgattaacgcaccgcagcat
caggttatctcggggccgcacccatcgccgttatcggcctatcgtggattctttggttgt
cagcatttctcaaaaattaatgcgatcttgcaagctagaggcgaagtgccgatagactgg
caggtataa
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