Shewanella pealeana: Spea_3322
Help
Entry
Spea_3322 CDS
T00606
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spl
Shewanella pealeana
Pathway
spl00061
Fatty acid biosynthesis
spl00071
Fatty acid degradation
spl01100
Metabolic pathways
spl01212
Fatty acid metabolism
spl02024
Quorum sensing
spl04146
Peroxisome
Module
spl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Spea_3322
00071 Fatty acid degradation
Spea_3322
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Spea_3322
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spea_3322
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spl01004
]
Spea_3322
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spl04147
]
Spea_3322
Enzymes [BR:
spl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Spea_3322
Lipid biosynthesis proteins [BR:
spl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Spea_3322
Exosome [BR:
spl04147
]
Exosomal proteins
Exosomal proteins of breast milk
Spea_3322
Exosomal proteins of breast cancer cells
Spea_3322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABV88637
UniProt:
A8H7V0
LinkDB
All DBs
Position
4064078..4065676
Genome browser
AA seq
532 aa
AA seq
DB search
MAYDSDSTLDLSRYASLIDLIELASARYGDKAAYSCLGQETSFNEINRYSRQFAAYLQQE
TNLVQGDRIAIQLPNITQFVIAAYGAIKAGMVLVNTNPLYTQRELIHQFNDSGAKALVVL
SDLLPTLTEVVENTGIETVISTHAMDLIAPQPQPEVPFATVPFCEVLAKGEQLTYAPVIS
VLGQIAALQYTGGTTGLSKGAMLTHGNLIANAMQIKSRLGSRIIEGEEIFVAPLPVYHIY
AFMVNLVLYYERGGCSVLIPNPRDIAGLISTLSKYPFTGFAGLNTLFVGLCHQPEFKALD
FSHLKVTISGGTALTQAAANIWQQTTGCTISEGYGLSETSPVVSLNSPGLEQLGTIGKPV
IATQVKILDMDDNEVAIGETGELAVFGPQVMLGYWNNQTETDKVMTKTGFFKTGDIAIAT
EDGFHKIVDRKKDMIIVSGFNVYPNEVEDILSNHDAILECAVIGVNDERSGEAVKAVIVL
NDSHADKDQAITMIDSYCREQLAAYKVPKIIEFVEVLPKSTVGKILRRELRK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgattcagactcaactctagacctatcgcgttacgcttcccttatcgatcta
atagagcttgccagtgcccgctacggtgacaaggctgcttattcatgccttggtcaagaa
actagctttaacgaaatcaaccgctattcacgccagtttgccgcttatctccagcaggaa
accaacctagtacaaggagacagaattgccattcagctgcccaacattacccagtttgtt
atcgcggcttacggtgcaatcaaggcaggaatggtgctggttaataccaatccactctat
actcagcgcgaactcattcaccagttcaacgactcgggcgccaaggccttagtggtactg
tctgacttattacccacattaactgaagtggttgagaacacaggtatcgaaactgtcatc
tcaacccatgcgatggatttaatcgcgccgcagccacaacctgaagtcccctttgctaca
gtgcctttttgtgaggtgttagcaaaaggagaacagcttacctacgcgccagttatcagc
gtgctcggccagattgcagccttgcagtacacaggtggcaccacaggtctttcaaaaggc
gccatgctgacccacggcaatttaatcgccaatgcgatgcaaattaagtctcgtttaggt
agccgaattattgaaggtgaggagatcttcgtcgcgccattacctgtgtatcatatctac
gcctttatggtgaatctggtgctttattatgagcgcggcggctgctcggtattaatccct
aatccgcgagatatagctgggctaatttcaaccctatcaaagtatccttttaccggcttt
gcaggtcttaacaccttgtttgttggcctttgtcaccagcccgaatttaaggcgctggac
tttagtcaccttaaagtcaccatttctggcggcaccgcactcacccaagcggcggctaac
atttggcagcaaacaacaggctgcaccatctctgagggctacggcttatcggaaacctca
cccgtggtatcactcaactcaccaggacttgagcaactcggcaccataggtaagccagtg
attgctactcaagtgaaaatcttggatatggatgataacgaagtggccattggtgaaacg
ggtgagcttgcggtatttggtccgcaggtgatgctaggttactggaataaccagactgag
accgacaaagtgatgaccaaaacaggcttctttaagaccggggatattgctattgctact
gaagatggctttcataaaatcgtcgatcgcaagaaagatatgattatcgtctctggcttt
aatgtttacccaaatgaggtcgaagatatcttatctaaccatgatgctattttggaatgt
gccgtgattggcgttaacgatgaacgcagcggtgaagcggtgaaagccgtaatcgtgctc
aatgatagccatgcagacaaagaccaagccatcactatgatagatagctactgccgtgag
caacttgccgcctataaggtacctaaaatcatcgaatttgttgaagttctgcctaagtct
accgtcggcaaaattttgagacgcgaactacgcaagtag
DBGET
integrated database retrieval system
