Shewanella pealeana: Spea_3444
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Entry
Spea_3444 CDS
T00606
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spl03000
]
Spea_3444
Transcription factors [BR:
spl03000
]
Prokaryotic type
Helix-turn-helix
Other families
Spea_3444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
AAA_5
Mg_chelatase
MCM
AAA
HTH_8
AAA_2
IstB_IS21
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABV88757
UniProt:
A8H870
LinkDB
All DBs
Position
4209369..4210919
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AA seq
516 aa
AA seq
DB search
MALSQSDLTRIALDITSGLSDHDRFSRLLDTVRQTLHCDAAALLQFTGRQFTPLAIDGLS
PDVLGRRFILSEHPRLEAIARAGDVVRFPADSELPDPYDGLIPHQEDHLMVHACIGLPLV
ADGALIGAVTIDGFDPEQFNDFSDKELRTLSAIASASLNNALLIEKLEKQALQSQEPSSF
NHSSDSEVEMIGQSPAMLAMKNELKVVASTDLNVLILGDTGTGKELVAKSIHQGSPRSSK
SLVYLNCAALPESVAESELFGHVKGAFTGAISHRSGKFEIADKGTLFLDEIGELPLSLQS
KLLRVLQYGDLQKVGSDKSLKVDVRIIAATNKDLKQEVLAGRFRADLYHRLSVFPVIVPP
LKEREGDIILLSGFFVERSRGKLGLKSLRLSPDSIKLLNSYDWPGNVRELEHVLHRAAVL
ARAQAQSNIALITPQHFDFYNQQAKNIAAVPPSIGSKSVLQSTKTEQTLKLATEAFQAQY
IRQALAANGHNWAATARALDVDSGNLHRLAKRIGIK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagtcaaagcgaccttacccgtattgcactggatatcacttcaggcttgtcc
gaccatgacagattctcaaggctactcgatacagtgaggcaaactctgcactgtgacgcc
gccgcgctgctgcaatttactgggcgacaatttacgccgctggcgatcgatggtttgagc
cccgacgtgctaggcaggcgctttatcttaagcgagcatccaaggctcgaggccattgct
cgtgctggcgatgtggtgagatttcctgccgacagtgaactacccgacccttatgatggt
ttaatccctcatcaagaagatcatttgatggtgcatgcctgtattggtctgcctttagtc
gctgacggcgcgcttatcggcgcggtcactatcgatggtttcgaccctgagcagttcaac
gattttagcgataaagagctacgcaccttaagtgctatcgcttcggcatcactgaataac
gccctgcttattgagaagctagaaaaacaggcgctgcagtcgcaagagccatcatcattt
aatcacagcagcgacagtgaagttgaaatgattggccaatcacctgccatgctagcgatg
aaaaatgagcttaaggtagtggccagcaccgatcttaacgtgttgattttaggtgataca
ggtaccggtaaggagctagtcgctaaatccatccaccaaggttctccccgttcaagcaag
tctctggtttatcttaactgcgcagcattaccagaatctgtcgccgaaagtgagctgttc
ggtcatgtaaaaggggcctttactggcgctatcagccaccgtagtggtaagtttgaaatc
gccgataagggcacactatttttagatgaaataggcgagttaccgctgtcattacagtct
aaattgctgcgagtattacagtatggcgacttgcaaaaagtcggctcagataaaagccta
aaagtggatgtgcggatcattgccgctaccaataaagatctcaaacaagaagtgttagcg
ggtcgttttagagccgacctttaccacagactcagtgtatttcccgttatagtgccgcct
ctaaaagagcgcgaaggtgacattattttactgagcggtttcttcgtcgagcgcagcaga
gggaaattgggtctaaagagccttagactcagcccagatagcataaaattgctaaacagt
tacgactggcccggtaatgtgcgagaactcgaacatgtattgcaccgcgccgcggtgtta
gctcgcgcccaagcccaatctaacattgcactgatcacgccgcagcactttgatttttat
aatcaacaagcaaaaaatatcgcagcagtgccccctagtatcggctctaaatcagtctta
cagtcaacaaagactgagcaaactcttaagctggcaaccgaagcatttcaggcgcaatat
attcgccaagcattagctgccaacggccataactgggcggcaaccgcaagggcactcgat
gtcgactcgggcaacctacaccgcctagcaaagcgcatcggcataaaataa
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