Shewanella pealeana: Spea_3551
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Entry
Spea_3551 CDS
T00606
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spl02000
]
Spea_3551
Transporters [BR:
spl02000
]
Other transporters
Pores ion channels [TC:
1
]
Spea_3551
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ABV88864
UniProt:
A8H8H7
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Position
4336174..4339362
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AA seq
1062 aa
AA seq
DB search
MHRFLLLLLCLFALSANANSPLQIEKRLGLSSTNTELTPQDQLSLLQDKIHELALTENSA
RELLNNYAEHKQNLLSQIQDAQNTLNDSDQQDINQQASLAYLRLSELKDVEISLGQKINA
LIKSHSQLPDALVNARAALQKHKKIRIGEEQTINNQLISAQGQLYEQDVKTLEAVLASSQ
KEIDLNQLQLKLVREQLAQQELLIERLNQKIVLQREARTEAAIAGSLLPDDKSHDPIAQE
LSDSNLVYGENLKQLNQKISLTLTQQEKAEAQYQAQAKQLTTIQQQIGWIKLNSAFGERF
LQMLQALPKPPSQEPLQSEIANTRLARYQIEQAQTLNSQQVTSIGADNSLQAKLLSSQGL
LLQQLLQSYDQYISELADLRVSYEQLNQQYLTLKSTLNEHLFWVPNANSIGGLWITDLHQ
SIQWMLQQAPWGQMQSSFDEQSTLWSLWLILFVISIITQDILTPKFKSAMRRELPFVGNV
TQDKFIYTFHVLSNSLGYSLLKPLPIVLAGGIFYLSSHNFVSAIGMGIMALGLLYQLYRF
IYLLALDRGLLINHFKAPKSMVRSGQERFRKFTIMATPFLAIMAFTEVIDTSLVRNSLGR
GAFIIFCLMLFWFYKDMLSLSNKENTAEHSKNKKLLQKLLWAMLIFMPLACAVLAFQGYY
YTAFQMFLQLQLSLIFGLGFLLLFNLIKRWMLIERRRIAFERAKAKRAEVLAQREKGELN
VNEQADTYEEPIVDLETISSQSLGLVRSLLLLAFLASIVGLWTQTHTALFSLLDGVTLWS
SNTTVNGIDQQIPITLKSLLLSLIIVGFSMMIATNLPGLIELTILQRLDLSQGTGFALTT
VSRYLVVMFGVLAGFSTLGMEWSKLQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVR
IGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIVPNKAFITEQLINWSLSDPITRVIIYV
SVARDSDPARVEAALYQAVQECDDALLSPEPEVWFAGFGQHTQDFEVRAYAKDMGTRWPL
KHKLHKQISKKLRENDLELAYPQLEVHLSSNQNKDVQSLLRT
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgttttttattgcttctgctgtgcctatttgccttatcggctaacgctaactcg
ccacttcaaattgaaaaacgactagggctctcatctacaaatactgagttaaccccacag
gatcaattaagcctgttacaggacaagatccatgagttagccctaacagaaaatagcgct
cgcgagctgttaaataactatgccgagcataagcaaaatttgcttagtcaaattcaagat
gcacaaaacacattaaacgactctgatcagcaggatatcaatcagcaggcctcactcgcc
tatctacgtttatcagaactcaaagatgttgagatcagcttagggcagaaaatcaatgcg
ctaataaagtctcacagccagctgccagatgccttagtaaacgccagagccgcattacaa
aagcacaaaaaaattcgcatcggtgaagagcaaaccattaacaatcagctcatcagcgcc
caaggacagctttatgagcaagatgttaaaacactcgaagccgtattagccagcagccaa
aaagagatcgacttaaaccagctacagctaaagttggtgcgtgaacaattggctcaacaa
gagctactgatcgagcgcttgaaccaaaagatcgtcttgcagagagaggcacgcaccgaa
gccgccattgccggcagtttattacccgacgacaaaagccacgatcctattgctcaagag
ctcagcgatagcaatttagtgtatggtgagaatttaaagcaactgaatcaaaaaatcagt
cttaccctgactcaacaagaaaaagctgaagcccaataccaggctcaggccaaacagcta
acaacaatacagcagcaaattggctggattaagctcaattcagccttcggtgaacgcttc
ttacagatgctgcaagccctgcctaagccgccaagtcaggaacctcttcaaagcgaaata
gctaacacacgactcgcccgataccagattgagcaagcgcaaaccctaaatagccagcaa
gtcacatcgattggcgccgataactcgctgcaggcgaaactgctctcttcgcaagggcta
ctactgcaacagctattacagagttatgatcaatacataagcgagctggccgatcttagg
gtcagttatgagcagctaaaccagcaatatttgaccctaaagagcactctcaatgagcac
ctgttctgggttcctaatgctaacagcataggcggtttatggatcaccgatctacaccag
agtattcagtggatgctgcagcaagccccatggggacagatgcaaagctcctttgatgaa
caaagcaccctatggtcactgtggctcattctgtttgttatcagcatcatcacccaagat
attttgacaccgaaatttaagtcagcaatgcgtcgagagctaccttttgtcggcaatgtg
actcaagataagttcatctatacattccatgtactgagcaactcgctgggttacagccta
ctcaagcccctacctatcgttttggctggcgggatcttctacctatcaagccataacttt
gtctcagccataggcatggggatcatggcattgggtctactctaccaactctaccgcttc
atctatctactggcgttagacagaggcttgttaatcaaccactttaaggcacccaaaagc
atggtgcgttccggacaggaacgctttagaaagttcaccattatggcaacaccttttcta
gccatcatggcctttaccgaagtaatagatacctctctggttcgaaatagtctgggccgt
ggtgcatttattatcttctgtcttatgctgttttggttttacaaagacatgctcagccta
tctaacaaagaaaataccgcagagcacagtaagaataagaagctgctgcagaagctattg
tgggccatgctgattttcatgcccctcgcctgtgctgtgctagcatttcagggctactat
tacaccgcattccagatgttcctgcagctgcagttatcattgatattcggtttaggcttc
ttgttgctgttcaacttaatcaagcgttggatgttaatagagcgtcgccgtatcgccttc
gaacgagctaaggccaaacgtgcagaagtgctcgcacaacgtgaaaaaggtgagctgaat
gttaacgagcaagccgacacctacgaagagccgatcgtcgatcttgaaactatctctagc
cagtctttaggattagtgcgctcactgttattgctggcatttttagccagtatcgtcggc
ttatggactcagacccacaccgcactgttctctttactcgacggagtcaccttgtggtcg
agtaacaccacagtcaacggtatagaccagcagatcccgataacccttaagtccctgctt
ttatcgctaatcatcgttggtttctcgatgatgattgccactaacctgcccggtcttatc
gagctgacaattctacaaaggctagatctcagccaaggcacgggctttgctttaaccaca
gttagccgctatttagtggtgatgttcggtgtgctggcaggtttttctactttaggcatg
gaatggtctaagttacagtggctggttgccgcactctcggttggtttaggttttggctta
caagagatctttgcaaactttatctcgggtttgatcattctatttgagaaaccagtgcgg
attggcgataccgtcaccatccgcgatctcactggtaccgtgagtaaaatccaaattcgt
gccaccaccattatcgattgggatagaaaagagatcatcgtgcccaacaaggcctttatt
accgagcagctaatcaactggtcgctatcagaccctatcacgcgagtgataatctatgtg
tctgttgcccgagactctgatcctgcacgagtagaagcggcgctttatcaagcagtgcaa
gaatgtgacgatgcgctactctcaccagagccagaggtgtggtttgcaggctttggccaa
catactcaagatttcgaagtacgcgcttatgcaaaagatatgggcacccgttggccgctt
aagcacaagctgcataaacagatcagtaagaaactgcgggagaacgatctagagctggct
tacccgcagcttgaagtgcatctttcttctaaccagaataaagacgttcagagcttattg
agaacctaa
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