Shewanella pealeana: Spea_3977
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Entry
Spea_3977 CDS
T00606
Name
(GenBank) RNA polymerase, sigma 32 subunit, RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spl03021
]
Spea_3977
Transcription machinery [BR:
spl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Spea_3977
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ABV89287
UniProt:
A8H9Q0
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Position
complement(4832882..4833739)
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AA seq
285 aa
AA seq
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MTVQTQSMALMVPQSSGSLESYVHSAHNIPMLEADKEYELAKRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKKRLGWFSDSEVGMVAESLGVSKADVTEMESRMAA
QDPAFDLASDNDDEQDYAPMHYLEDHSSDLASQVENDNWEQNNQARLLSAIKTLDERSQH
ILKARWLDEDKTTLQDLAATYQVSAERIRQLEKNAMNKLKGCMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcaaacgcaatcaatggcactaatggttccccaaagtagtggaagcctcgag
tcttatgttcattcagcacacaacatcccaatgttggaagcggataaggaatatgagcta
gcgaagcgtctgcaagaaactggtgacctacaggctgcgaaacagttgattatgtcgcac
ttacgttttgtggtacatgttgcaaaaggttactctggctatggtcttccacaagctgac
ttgatccaagaaggtaatatcggcctgatgaaggcggttaagcgtttcgatccagatgtg
ggcgttcgcttagtatcgtttgccgtgcactggattaaagctgaaattcacgaatatgtg
cttaaaaactggcgcatagttaaagtggcgaccactaaagcacaacgtaagttgttcttt
aacctgcgtaaggctaaaaagcgtctaggctggtttagcgatagtgaagtgggcatggta
gctgagagtctcggtgtgtcgaaagccgatgtgaccgagatggagtcacgcatggcggcg
caagatcctgcatttgatctggctagcgacaacgatgatgaacaagattatgctcctatg
cattaccttgaagatcattcatcagatttagcgtctcaagttgaaaatgacaactgggaa
cagaataaccaagcgcgtttgttatcggctattaagactctcgatgagcgtagccaacat
attctaaaagcgcgttggttagatgaagacaagaccacattgcaagatttagcggcgact
tatcaagtgtcggctgaacgtattaggcaattggaaaagaatgcaatgaataagcttaaa
ggctgtatggaagcctag
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