Streptomyces platensis: CP981_00685
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Entry
CP981_00685 CDS
T07341
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
spla
Streptomyces platensis
Pathway
spla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CP981_00685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spla03021
]
CP981_00685
03019 Messenger RNA biogenesis [BR:
spla03019
]
CP981_00685
Transcription machinery [BR:
spla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CP981_00685
Messenger RNA biogenesis [BR:
spla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CP981_00685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
AAA_22
ATPase_2
Spore_III_AA
ddrB-ParB
AAA
AAA_19
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QEV50397
UniProt:
A0AAE6ND00
LinkDB
All DBs
Position
complement(154486..155733)
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AA seq
415 aa
AA seq
DB search
MYRRPERTTVTRSTQLRTPTTAPSPATALSRTTAPSRTAAQSAAAPTQPVVTATGILDVG
NERQDGFLRAEGYRASSHDVRVPAALIRAAGLRTGDFVVGVCDRPRLLARVETVNGHRPG
AVRGRPHFRDLTPLHPRHRIRLESPTGGPAPRIVDLLTPIGKGQRGLIVAPPKTGKTVLL
QQLAAAVAENHPECRLMVVLIDERPEEVTEMRRSVRGEVLASTFDRPAKEHIALAELAVE
RAKRLVEHGQDVVILLDSLTRLCRAHNNAAASGGRTLSGGVDAAALHGPKRLFGAARLAE
EGGSLTLLATALVETGSRADDYFFEELKSTGNMELRLDRVLAGKRVYPAVNAVASGTRRE
ELLLTPAELAATRRLRRALRTGDGPAHLQSLLEKVRRTPDNATLLRQLQHTAPGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgtaccgacgtcccgagaggaccaccgtgaccaggagcacccaactccgcacccccacc
actgccccgtctcccgccactgccttgtcccgcaccacggccccgtcccgcaccgccgca
cagtctgctgccgcgcccacgcaacccgtggtcacggcgaccggaatcctggacgtgggc
aacgaacgccaggacggctttctccgcgcggagggctaccgtgcctcgtcccacgatgtc
cgggtgcccgccgcgctgatccgtgcggcgggcctgcgcaccggcgacttcgtcgtcggg
gtctgtgaccggccacgcttgctcgcccgggtcgaaacggtcaacgggcaccggccgggc
gccgtgcgcggccggccgcacttccgtgacctcacaccgctgcacccccggcaccgcatc
cgcctggaaagccccaccggcggaccggccccgcgcatcgtcgacctgctgacgccgatc
gggaaggggcagcgcgggctgatcgtggcaccaccgaagaccgggaaaaccgtgctgctg
caacagctcgcggccgccgtcgccgagaaccacccggagtgccggctgatggtcgtgctg
atcgacgaacggccggaagaagtcaccgagatgcgtcgctccgtacgcggcgaggtgctc
gcctccaccttcgaccgcccggccaaggaacatatcgccctcgccgaactggccgtggaa
cgggccaaacgactcgtcgagcacggccaggacgtggtcatcctgctcgactccctcacc
cggctgtgccgggcccacaacaacgccgccgcgtccggtggccgcacgctgagcggaggc
gtcgacgccgccgcgctgcacggccccaagcggctcttcggtgcggcgcggctcgccgag
gagggcggttcgctgaccctgctcgccacggccctggtggagaccggatcccgcgccgac
gactacttcttcgaggagttgaagagcaccggaaacatggagctgcggctggaccgggtg
ctcgcgggcaagcgggtctatccagcggtcaatgccgtcgcctccggcacccgtcgggag
gaactgctcctcaccccggccgaattggcggcgacccgccgcctgcgccgcgccctgcgg
accggcgacggaccggcacatctgcagtccctgctggagaaggtccggcgtacgcccgac
aacgcgacgctcctgcggcagctacagcacaccgcccccggtgtctga
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