Streptomyces platensis: CP981_17405
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Entry
CP981_17405 CDS
T07341
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spla
Streptomyces platensis
Pathway
spla03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spla00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CP981_17405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spla03021
]
CP981_17405
03400 DNA repair and recombination proteins [BR:
spla03400
]
CP981_17405
Enzymes [BR:
spla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CP981_17405
Transcription machinery [BR:
spla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CP981_17405
DNA repair and recombination proteins [BR:
spla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CP981_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
QEV53209
UniProt:
A0AAE6TMU7
LinkDB
All DBs
Position
complement(3974042..3977941)
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEERRTRDLPSLEAHVSVERQQIEQRRDSDLEARAKKLETD
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWNRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLETFDLDEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTRNSPKGMVLDCIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDEEERKVIGE
GRAFGSAAEAIMAFDAKELSLQAKVDIRFPIGTVPPRGWTPPVPEEGEPEWQQGDSFRLR
TTLGRALFNELLPEDYPFVDYSVGKKQLSAIVNDLAERYPKVIVAATLDNLKAAGFHWAT
RSGVTVAVSDIVVPEAKKAIVAGYEAQDEKVQKQYERGLITKDERTQELINIWTKATNEV
SEAMNENFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIASKD
AAGVLRKADDVESSVYARMLAEDVVVDGKVVAPANVDLGDVLIDALVNAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
LGLPRVVELFEARTPKGVAPISEAAGRVRIEETEKTKKVVVTPDDGSDEMAYGVSKRARL
LVGEGDHVTVGQPMTVGAVNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVAIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERTKFEGENRRVVAEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGTGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgagctccggatcggtctggctaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgacgtgagcggatgggccacatcgagcttgccgctccc
gtgacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacctc
gcgcccaaggacctcgagaaggtcatttacttcgccgcctacatgatcacgtgggtggac
gaggagcgccgtacgcgcgacctgccctcgctggaggcgcatgtctccgtcgagcgtcag
cagatcgagcagcgccgcgactccgacctggaggcccgcgccaagaagctcgagaccgac
ctggccgagctggaggccgagggcgccaaggccgatgtgcgccgcaaggtgcgcgagggt
gccgagcgtgagatgaagcagctgcgtgaccgtgcgcagcgcgagatcgaccgtctcgac
gaggtctggaaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagctgctc
taccgcgagctgcgggaccgcttcggcacgtacttcgacggctccatgggtgccgctgct
ctgcagaagcgcctggagaccttcgacctcgacgaggaggccgagcgcctccgcgagatc
atccgcaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gccttcctgcagacccgcaacagccccaagggcatggtgctggactgcatcccggtgatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccgcaacaaccgtctgaagcggcttctcgacctc
ggtgcgcccgagatcatcgtgaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggtcgcccggtcaccggtcccggtaaccgtccgctgaag
tccctcagcgacatgctgaagggtaagcagggccgcttccgtcagaacctgctcggtaag
cgagtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgcccaaggccatggcgctggagctcttcaagccgttcgtgatgaagcgcctg
gtggacctcaaccacgcgcagaacatcaagagcgcgaagcgcatggtcgagcgcggccgc
acggtcgtctacgacgtgctcgaagaggtcatcgccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgtctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccattcagattcacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctcccgctgtccgcggaggcccaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtcaccatgccgacccaggac
atggtgctcggtctcttcttcctcaccacggatgaagaggagcgcaaggtcatcggtgag
ggccgcgcgttcggctcggccgccgaggcgatcatggcgttcgacgccaaggagctctcg
ctccaggcgaaggtcgacatccgcttcccgatcggcaccgtcccgccccgcggctggacc
ccgccggttccggaggagggcgagcccgagtggcagcagggtgacagcttccggctgcgg
acgaccctgggccgtgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactcggtgggcaagaagcagctctccgcgatcgtcaacgatctggccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggccggcttccactgggcgacc
cgttccggcgtcaccgtcgccgtctcggacatcgtcgtgccggaggccaagaaggccatc
gtcgcgggctacgaggcccaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggacgagcgcacgcaggaactcatcaacatctggaccaaggcgaccaatgaggtc
tccgaggcgatgaatgagaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcgtcgttccgcgagggtctgtcc
gtgctggagtacttcatctccacccacggtgcccgtaagggtctggcggacaccgccctt
cgtaccgccgactccggttacctcacccgtcgtctggtcgacgtctcccaggacgtcatc
attcgcgaggaggactgcggcaccgagcgcggcctcaagctgcggatcgcctcgaaggac
gccgcgggtgtcctgcgcaaggcggacgacgtcgagtccagcgtctacgcccgcatgctc
gccgaggacgtcgtcgtcgacggcaaggtcgtcgccccggcgaacgtcgacctcggtgac
gtgctcatcgacgcgctggtcaacgcgggcgtcgaggaggtcaagacccgctcggtcctg
acctgtgagtccgcggtcggcacctgtgccttctgctacggccgttcgctggccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggcacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
ctgggtctgccgcgtgtcgtcgagctcttcgaggcccgtacgcccaagggcgtcgccccg
atctcggaggcggccggccgcgtccggatcgaggagaccgagaagaccaagaaggtcgtc
gtcaccccggatgacggcagcgacgagatggcctacggcgtctccaagcgtgcccgtctc
ctggtcggcgagggtgaccacgtcacggtcggccagccgatgaccgtgggtgccgtcaac
ccgcacgacgtgctgcggatcctcggccagcgtgccgtccaggtccacctggtcggcgag
gtccagaaggtctacaacagccagggcgtggcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgtgtgacgatcatcgagtccggcgacgcggagctgctgccg
ggcgagctggtggagcgcacgaagttcgagggcgagaaccgtcgggtcgtggcggaaggc
ggccacccggcctccggccgtccgcagctgatgggtatcaccaaggcttcgctggcgacg
gaatcctggctgtcggccgcctccttccaggagacgacccgagtgctgacggacgcggcg
atcaacgccaagtccgactcgctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggcctgtcccgctaccgcaacatccgggtcgagcccaccgaagag
gccaaggccgcgatgtactcggccgtcggttacgacgacatcgactactcgcccttcggc
accggctccggccaggcggtcccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
