Streptomyces platensis: CP981_18080
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Entry
CP981_18080 CDS
T07341
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
spla
Streptomyces platensis
Brite
KEGG Orthology (KO) [BR:
spla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spla03016
]
CP981_18080
Enzymes [BR:
spla01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CP981_18080
Transfer RNA biogenesis [BR:
spla03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CP981_18080
Prokaryotic type
tRNA splicing ligases
CP981_18080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QEV53326
UniProt:
A0AAE6TMY3
LinkDB
All DBs
Position
complement(4113730..4114923)
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AA seq
397 aa
AA seq
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MSYVEVPGAQVPIRMWTDPSTVEDVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDDPVDPG
RLHGFPTARWDDFWARFDGVAEAVKFRQERATKQMGSLGSGNHFIEFCLDDDGVVWLMLH
SGSRNIGKELAEFHMGQAQKLPHNQGLVDRDLAVFIADTPPMAAYRNDLFWAQEYARHNR
DVMMALFQDVVRKEFKKAKVTFDDVISCHHNYVAEEQYDGMDLLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVKGLGNAASFNSASHGAGRKMSRNQAKKRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVIDQQRDLVEVVAKLKQVICVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacgtcgaggtgccgggtgcccaggtaccgatacggatgtggacggacccgtcc
acggtcgaggacgtcgcgatgcagcagctgcgcaatgtcgccaccctgccgtggatcaag
ggcctggccgtgatgccggatgtccactacgggaagggcgccacggtcggctcggtgatc
gccatgcgcggcgccgtctgcccggcggcggtcggcgtcgacatcggctgcgggatgagc
gcggtacggacctcgctcaccgccaatgacctgcccggcgacctgtcccggctgcgctcg
aagatcgagcaggcgattccggtgggccgggggatgcatgacgacccggtcgacccgggc
cggctccacggcttcccgacggcccggtgggacgacttctgggcgcggttcgacggggtc
gccgaagcggtcaagttccgtcaggagcgggccacgaagcagatggggtcgctcggctcg
ggcaaccacttcatcgagttctgcctcgacgacgacggtgtggtgtggctgatgctgcac
tccggctcccgcaacatcggcaaggagctcgccgagttccacatgggccaggcgcagaag
ctgccgcacaaccagggcctggtcgaccgtgacctcgccgtcttcatcgcggacaccccg
ccgatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgcgcggcacaaccgg
gacgtgatgatggcgctcttccaggacgtcgtccgcaaggagttcaagaaggcgaaggtg
accttcgacgacgtgatctcctgccaccacaactatgtggcggaggagcagtacgacggc
atggacctgctggtgacccgtaagggcgcgatccgggcgggcagcggcgagtacgggatc
atcccgggctcgatgggcaccggctcctacatcgtcaagggtctggggaacgccgcgtcc
ttcaactccgcctcccacggcgccggccgcaagatgagccggaaccaagcgaagaagcgg
ttctccacgcgggatctggaggagcagacccggggcgtggagtgccgtaaggactcgggt
gtcgtcgacgagatcccgggcgcctacaagccgatcgagaaggtcatcgaccagcagcgc
gacctggtcgaggtcgtcgccaagctcaagcaggtcatctgcgtgaagggctga
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