Sulfuriferula plumbiphila: SFPGR_00490
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Entry
SFPGR_00490 CDS
T06621
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splb03016
]
SFPGR_00490
Enzymes [BR:
splb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SFPGR_00490
Transfer RNA biogenesis [BR:
splb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SFPGR_00490
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
CM_2
Motif
Other DBs
NCBI-ProteinID:
BBP02627
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All DBs
Position
complement(46082..47959)
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AA seq
625 aa
AA seq
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MYLLYEEDGSFKAGTIITDNDTSLQVDTQHGKRAKVKAITVMMRFNAPAPAEFMDAAHAV
RDEADADFLWEVAGSEEFGFADLAREYFGHEPKPVEAAGILMRLHEAPMHFYKKGRGRYK
PAPPEALAAAKAGVERKQREAELLARYVAQLSAYQLPEEFAAHLDMLLYAPDKNRLEWKA
LDDVCKATGLTPVKLLDRCGAIPSSHDYHLGAFLREHFPRGTGFGDAHELPDPPQLPDAG
VQAFSMDDAATTEIDDAFSVTRLDTGNWRVGIHIAVPALGIVPASALDEIAARRLSTVYY
PGGKITMLPDAAIHHYTLGETHTCPALSMYVEVSDGEWKVLNQETRLEQVHIAANLRHET
LEAHFHTGSIANDSADYPFKAELDMLWHFSGALEAARDKTPDPNVPPRADYNFKVENDRV
SITDRVRGNPIDRVVSELMIYVNSEWGRWLAETDTMALYRTQQNGKVKMSTRPAPHVGLG
VAQYTWASSPLRRYVDLLNQRQIMALAQGVPPPYAPKSEVLYTALRDFEVAYDAYNNFQR
NMERYWCLRWLVQEGITEINAGVIRENLVRLDGLPFVTRVHSLPELPPGSRVSLAVDGVD
LFEVELLCSFRRRLDMAPATEPAVQ
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtatttactttacgaagaagacggcagcttcaaggccggcaccatcatcaccgacaat
gacacctcgttgcaggtggatacccagcacggcaagcgtgccaaggtgaaggccatcacc
gtgatgatgcgttttaacgcaccggcgccggcggaattcatggacgcggcgcacgccgtg
cgcgacgaggcggacgcggattttctgtgggaggtggcgggcagcgaggaatttggcttt
gccgatctggcacgcgaatatttcggccacgaacccaagccggtggaagcggcggggata
ctgatgcgcctgcacgaagcgcccatgcatttctacaagaagggccgcggccgctacaag
cccgcgccacccgaagcactggccgccgccaaggccggcgtggaacgcaagcagcgtgaa
gcggaactgctggcacgttatgtggcgcaactgagcgcgtatcaattgccggaagaattc
gccgcgcacctcgacatgctgctgtacgcgccggacaaaaaccggctggagtggaaagcc
ctggacgacgtctgcaaggccaccggcctgaccccggtcaagctgctggatcggtgcggc
gcgattccctccagccacgattaccatctgggcgcgttcctgcgcgagcacttcccgcgt
ggcaccggtttcggcgacgcccacgaactgcccgacccgccgcaactgccggatgcgggg
gtacaggcgttcagcatggacgacgccgccaccaccgagattgacgacgccttttcagtc
acgcgtctggacaccggcaactggcgcgtgggcatccatatcgccgtccccgcgctgggc
atcgtgcctgcatcggcgctggacgaaatcgccgcgcgccgcctgtccacggtgtattac
cccggcggcaagatcaccatgctgcccgatgcggccatccaccattacaccctgggcgag
acccacacctgcccggcgctatccatgtatgtggaagtgagtgacggcgagtggaaagta
ttgaaccaggaaacccgcctggagcaagtccatatcgccgccaacctgcgccatgagacg
ctggaggcgcatttccataccggcagcatcgccaatgacagcgcggattacccgttcaag
gctgaactcgacatgctctggcatttttccggtgcgctggaggccgcgcgtgacaaaacc
cccgatcccaacgtgccgccgcgtgccgattacaacttcaaggtggaaaacgaccgcgtc
agcattaccgaccgggtgcgcggcaatccgatcgaccgcgtggtgtccgagttgatgatc
tatgtgaattcggaatgggggcgctggctggcggaaaccgacaccatggcgctgtaccgt
acccagcagaacggcaaggtgaagatgagcaccaggcccgcgccgcacgtggggctgggc
gtggcgcaatacacctgggcgagttcgccgctgcggcgttatgtggatctgctcaaccag
cgccagatcatggcgctggcgcagggcgtgccccccccttatgcgccgaaatccgaggtg
ctgtataccgcattgcgcgatttcgaggtggcttacgacgcctacaacaacttccagcgc
aacatggagcgttactggtgcctgcgctggctggtgcaggaaggcatcaccgaaatcaac
gcgggcgtcatcagggaaaacctggtgcgcctcgacggtttgccgtttgtgacgcgcgtg
cactcattgccggaactgccgccgggcagccgcgtcagcctggccgtggacggcgtggac
ttgttcgaggtggaactgctgtgcagtttccggcgcaggctggacatggcgcctgccacg
gaacctgcggtccagtaa
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