Sulfuriferula plumbiphila: SFPGR_03690
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Entry
SFPGR_03690 CDS
T06621
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_03690 (sbcD)
DNA repair and recombination proteins [BR:
splb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SFPGR_03690 (sbcD)
Archaeal homologous recombinant proteins
SFPGR_03690 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos_2
Metallophos
CBP
Motif
Other DBs
NCBI-ProteinID:
BBP02947
LinkDB
All DBs
Position
complement(354917..356227)
Genome browser
AA seq
436 aa
AA seq
DB search
MIRIAQFSDLHYSEKHLTEADRCFTYAIDRAIAIKVDAAVISGDATDHALDVHAPAVERL
ARNVRRLADHCPILMLQGTYSHEPPGTLSIFRLLGGRYPVHVADRIGQVALTPDGRWIAS
DGWRFDQAPNAMRALFSCVPTVNKAAVAAAVGASAAAEAVGEQLGILLRGFAPSNQAARE
TAVPTIGVSHGTVYGCLTEHGVPMAGFDHEFTTGTLFGAQAQAFMLGHIHRHQGWEANGR
RVAYAGSIGRFHYGEEGDKGFLLWEIGAATARFTLEPTPARRTIDICFDGKPDLEAIQAA
VHAQGIEGAFVRVRWNVPDEDRHEVDRGAIQRMLHAAAEVKLEGRIVPVVRTRAAGISQA
ATIADKVRAWAQATEAKAGPLLACLEALQVRAPEAIASDILERQIETAAPVLVSAVAIAL
PALRERAIADATPKLF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaatcgcgcagttttccgacctgcactatagcgagaagcacctgacggaagcc
gatcgctgcttcacctacgccatcgatcgcgccatcgctatcaaggtcgacgcggcggtc
atctcgggcgatgcgaccgaccatgcgctcgacgtgcatgcgccggcggtggaacgcctg
gcgcgcaacgtcaggcggctggcggaccattgcccgatcctgatgttgcagggaacctac
tcgcatgaaccgccgggaacgctgtcgatcttccgcctgctgggcgggcgctatcccgtg
cacgtcgcggatcgcatcggccaggtggccctgacgcccgacggccgctggatcgcctcc
gatggctggcgcttcgatcaggcgccgaacgccatgcgggcgctgttctcctgcgtgccg
acggtgaacaaggcggccgtcgcagcggcggtgggcgcgagcgcggctgcggaagccgtc
ggcgagcagctcgggatactgctacgcgggtttgcaccgtccaatcaggcggcgcgggaa
acggctgtgccgaccatcggcgtctcgcacggcaccgtctatggatgcctgaccgagcac
ggcgtaccgatggccgggttcgatcatgagttcacgacggggacgttgtttggtgcgcag
gcgcaggcgttcatgctcggtcacatccaccgccaccagggatgggaggcgaatggccgg
agggtcgcgtatgcgggctcgatcgggcgcttccattacggcgaggaaggcgacaagggc
ttcctgctgtgggagatcggcgcggcgacggcacgcttcacgctcgaacccacgccggcg
cggcgaaccatcgacatctgtttcgatggcaagccggacctcgaagcgatccaggccgcc
gtgcacgcgcagggtatcgaaggcgccttcgtgcgggtgcgctggaacgtgcccgacgaa
gaccggcacgaagtcgaccgcggggcgattcagcggatgctccatgcagcggcggaagtg
aagctcgaggggcgcatcgtgccggtcgtgaggacacgcgcagccggtatttcgcaggcc
gcgacgatcgccgacaaagtgcgggcgtgggcgcaagcgaccgaagcgaaggctggcccg
ctgttggcttgtctggaagccctgcaggtgcgcgcgccggaagcgatcgcatcggacatc
ctggaacggcagatcgagacggcggccccggttctggtaagcgcggtggccattgcactg
ccagcgctgcgcgaacgtgccatcgccgacgccacgccgaaattgttttag
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