Sulfuriferula plumbiphila: SFPGR_04340
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Entry
SFPGR_04340 CDS
T06621
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
splb
Sulfuriferula plumbiphila
Pathway
splb02020
Two-component system
splb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFPGR_04340
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SFPGR_04340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splb03021
]
SFPGR_04340
Transcription machinery [BR:
splb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFPGR_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
GIY-YIG
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
BBP03012
LinkDB
All DBs
Position
418631..419866
Genome browser
AA seq
411 aa
AA seq
DB search
MQHHNNKIDAALLGKIVLARFLELPLRAVDRLAAQMESSAGFTALRPWVSVGRLEGARVA
HDAADIPQTRAPPILGEVHEAGRGLMFLYHRDSYVREYRFDEEGVNRLMARPDLPAELAG
VVSRLRLINTRNRLTHALMQAVLASQAAYLRSGQVLTLLPLTQAAISARLRSESNLAVVA
DAGRISRLVRGLSIMLPNGKAVPLNTLFPKPRQVHCHFVDYMIKEEKTWMAEGLLRGPLT
DEAVAAILKREHGIRLSRRTVANIRHGLAIPDYKSRSQRTDYLAATEGFSALVPLTAQAL
RTAVPAHSGVYEIRTAFTFRLGEEKAWPGKSVPPVPHGVVYIGSAGDLRKRLGDHLRGSS
ANALLYRHVADGAARVRFRLISTDWRVVERELYQVFCETFGVSPPCNRMSP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaccataacaataagattgacgccgcactgctcggtaaaatcgtgctcgcccgc
tttctggagttgccgctgcgggcggtagaccgtctcgcggcccagatggagtcctccgcc
ggctttaccgccctgcgtccctgggtgagcgtgggtcggttggaaggcgcgcgggtggcg
catgatgcggccgacatcccccaaacccgggcacccccgattctgggggaggttcacgag
gcgggccggggcctgatgttcctctaccaccgcgacagctacgtgcgggaataccggttc
gatgaggagggggtgaaccgcctgatggcgcgcccggacctcccggcggaactggcaggc
gtagtgagccggttgcgcctcatcaatacccggaaccgtctcacccatgccctgatgcag
gcggtactggcatcgcaggcggcatatctgcgttccgggcaggtcttgacgctcctgcct
ttgacccaggcggcaatttccgcccggctgcggtcggagtcgaatcttgccgtggtggcg
gatgcgggccgcatctcccggctggtgcgtgggctgtcgatcatgctgccaaacgggaaa
gcggtgccgttaaacaccctgttcccgaagccgcggcaggtgcattgccatttcgtggat
tatatgataaaagaagaaaaaacatggatggcagaagggctattgcggggaccgctgacg
gacgaggctgtcgccgccatccttaagcgggaacatggcatccgcttgtcgcggcgcaca
gtggccaatatccgccatggtctggcgattcccgattacaagagccgcagccagcgcacg
gattacctggccgctaccgagggattttccgccttggtgccgctgaccgctcaagcactg
cgcactgcggttccggcccattccggtgtgtacgagatccggacggctttcactttccgc
ctcggtgaagaaaaggcctggcccgggaaaagtgtgccgccagtgccgcacggcgtggtc
tacatcggctcggccggtgatttgcgcaagcgcttgggcgatcacctgcgcggcagcagc
gctaatgcgctgctgtatcgccacgtggccgatggcgccgcgcgggtgcggtttcgcctg
atcagtacagactggcgcgtggtggagcgggagttgtaccaggtattttgcgagaccttc
ggcgtgtccccgccgtgtaaccgcatgagcccttaa
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