Sulfuriferula plumbiphila: SFPGR_10150
Help
Entry
SFPGR_10150 CDS
T06621
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
splb
Sulfuriferula plumbiphila
Pathway
splb03410
Base excision repair
splb03430
Mismatch repair
splb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SFPGR_10150 (recJ)
03430 Mismatch repair
SFPGR_10150 (recJ)
03440 Homologous recombination
SFPGR_10150 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_10150 (recJ)
DNA repair and recombination proteins [BR:
splb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SFPGR_10150 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SFPGR_10150 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SFPGR_10150 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
DUF2529
Motif
Other DBs
NCBI-ProteinID:
BBP03593
LinkDB
All DBs
Position
complement(971791..973482)
Genome browser
AA seq
563 aa
AA seq
DB search
MVRITPRPYPESAARTLAASGLHPVLARIYAARGIVRPVQLETQLTGLISFDSLKNIHAA
ARRLADAITRQERVLVVADYDADGATACAVALRGLALLGGRADYLVPNRFEYGYGLTPEI
VRLAAERRPALIVTVDNGIASVAGVAEAKRLGIEVLVTDHHLPGDALPEALIVNPNQPGC
PFPSKNLAGVGVMFYVLLALRAELRSRGVFTADTLPNLAQLLDIVALGTVADVVRLDANN
RILVEQGLRRMRAGRACAGIRALFHAAGRDPARASAFDLGFTVGPRLNAAGRLEDMSLGI
SCLLTDDDTAALAIAQRLHALNAERRSIEADMQETALASLDAIETTDSYSLALFDAGWHQ
GVIGILASRLKDKFHRPAVCFARGNDGEIKGSGRSIGALHLRDALDIVSKRAPDLILKFG
GHAAAAGLSIREADFARFAALFEETVQGLLSPGDLAKVIETDGELPLETLNLELVQALDG
QVWGQGFPAPSFSGVFRVAQQRVVGEKHLKLRLEMAGRLFESILFFRDQPLPEHIQAVYR
PEMNIYNGSASLQLKLEHWAEET
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtcagaatcactccccgcccctaccccgaatccgccgcccgcacgcttgctgccagc
ggcctgcatccggtgctcgcgcgcatttatgcggcacgcggcatagtccggccggtgcag
ctggaaacccagctcaccgggctaatttccttcgattctctcaaaaacattcatgccgca
gcccggcgcctggcagatgccatcacccggcaggagcgggttttggtggtggcggattac
gatgccgacggcgccactgcctgcgccgtggcactgcgcgggctcgcgttgctgggcggc
agagcagattatctggtgccgaaccggtttgagtacggctacggcctcacacccgaaatc
gtgcgcctggctgccgaacgccgccccgctctgatcgtcaccgtggacaacggcatcgcc
agcgtggccggcgtggccgaggcaaaacggctgggcatcgaagtgctggtcaccgaccac
cacctgcccggtgacgcgttgcccgaggcgctgatcgtcaatcccaaccagccgggttgc
cccttccccagcaagaatctggccggggtgggggtgatgttttacgtgttgctggcgctg
cgcgccgaattgcgctcacgcggcgtgttcaccgcagacacactgcccaatttggcgcaa
ctgctcgacatcgtggcgctgggcacggtggctgacgtggtacggctggacgccaacaac
cgcatcctggttgagcagggtctgcgccgcatgcgtgcggggcgggcgtgtgccggtatc
cgcgcgctgtttcatgccgccggacgtgatcctgcgcgggcgtcggcgtttgatctcggt
ttcacggtggggccacgcctcaacgctgccgggcggctggaggacatgtccttgggtatt
tcctgcctgctcaccgatgacgacaccgccgcgctcgccatcgcccagcgcctgcacgca
ctcaacgccgagcgccgcagtatcgaagccgacatgcaggaaaccgcgctggcctcactc
gacgccatcgagaccaccgacagctacagcctggcgctgttcgacgcgggctggcaccag
ggcgtgatcggcatcctcgcctcgcgtctcaaggacaaattccatcgtcccgcagtgtgc
tttgcgcgcggcaacgacggcgagatcaaaggctccggccgttccatcggcgcactgcat
ttgcgcgacgcgctggacatcgtgtccaagcgcgcacccgacctgattctcaaatttggc
ggccatgcagcggcggccgggctgtccatccgcgaggccgattttgcccgttttgccgcg
ctgttcgaggaaaccgtgcaagggctgctgtcgcccggtgatctggcgaaagtgatcgaa
accgacggcgagttgccgctggaaaccttgaatcttgaactcgttcaggcactcgacggc
caggtgtgggggcaaggtttccccgcgcccagcttcagcggcgtgttccgcgtcgcgcag
cagcgtgtggtgggagaaaaacacctgaaactgcgcctggaaatggccggacggctgttc
gagagcatcctgtttttccgcgaccagccgctgcccgaacacattcaggccgtgtaccgg
cccgaaatgaacatctacaacggctcggccagtctgcaattgaagctcgagcactgggcc
gaggagacctga
DBGET
integrated database retrieval system
