Sulfuriferula plumbiphila: SFPGR_11200
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Entry
SFPGR_11200 CDS
T06621
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splb03032
]
SFPGR_11200 (hupA)
03036 Chromosome and associated proteins [BR:
splb03036
]
SFPGR_11200 (hupA)
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_11200 (hupA)
DNA replication proteins [BR:
splb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SFPGR_11200 (hupA)
Chromosome and associated proteins [BR:
splb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SFPGR_11200 (hupA)
DNA repair and recombination proteins [BR:
splb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SFPGR_11200 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
VWA_3
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBP03698
LinkDB
All DBs
Position
1069496..1069792
Genome browser
AA seq
98 aa
AA seq
DB search
MNKAELIDAVAARTDSTKAQTAAMLDALMVTVQEALTKQDTVQLVGFGTFAVAERAGREG
RNPATGKTITIPAKKVVKFKVGKAMADAVAGAKAGKAR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagctgaactgatcgacgcagttgccgccaggaccgatagcaccaaggcccag
acagcagcgatgctggatgccctgatggtcaccgtccaggaagcattgaccaaacaggat
acggtgcaattagtcggttttggcacttttgccgtggctgagcgcgcgggccgcgaaggc
cgcaatccggcaactggaaaaaccatcactattccagccaagaaagtagtcaagttcaag
gtgggtaaagccatggccgatgccgtggctggcgccaaagccggtaaagcccgctaa
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