Sulfuriferula plumbiphila: SFPGR_20110
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Entry
SFPGR_20110 CDS
T06621
Symbol
ihfB_2
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splb03032
]
SFPGR_20110 (ihfB_2)
03036 Chromosome and associated proteins [BR:
splb03036
]
SFPGR_20110 (ihfB_2)
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_20110 (ihfB_2)
DNA replication proteins [BR:
splb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SFPGR_20110 (ihfB_2)
Chromosome and associated proteins [BR:
splb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SFPGR_20110 (ihfB_2)
DNA repair and recombination proteins [BR:
splb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SFPGR_20110 (ihfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBP04589
LinkDB
All DBs
Position
complement(1952245..1952532)
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AA seq
95 aa
AA seq
DB search
MTKSELIVRLAARYPQLVVTDAELAVKTILDAVSKSLAEGERIEIRGFGSFSLNYRPPRL
GRNPKTGEKVAVPEKYVPHFKAGKELRERVDCKAV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagctgattgtgcggcttgccgcgcgctatccccagttggtcgttacc
gacgcagaactggcggtcaagaccatactggacgcagtttccaaaagcctggctgaaggg
gagcggatcgaaattcgcggttttggcagctttagcctgaactaccgtcccccgcgcctg
gggcgcaaccctaaaaccggcgagaaggtggcagtgcccgagaaatacgtgcctcacttc
aaagctggtaaagagttgcgtgagcgcgtggattgcaaggcagtctga
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