Sulfuriferula plumbiphila: SFPGR_25710
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Entry
SFPGR_25710 CDS
T06621
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splb03016
]
SFPGR_25710 (truB)
Enzymes [BR:
splb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SFPGR_25710 (truB)
Transfer RNA biogenesis [BR:
splb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SFPGR_25710 (truB)
Prokaryotic type
SFPGR_25710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BBP05149
LinkDB
All DBs
Position
2493962..2494894
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AA seq
310 aa
AA seq
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MQFKRIKRAVNGVLLLDKPAGITSNAALQIAKRLFQAEKAGHTGTLDPFAHGLLPLCLGE
ATKFSQYLLDADKAYRAVMRLGVTTTTGDPEGEVLDTRPVNVTPADLNAAIARFIGTTEQ
TPPMYSALKHQGRPLYEYARAGIEIARKSRHIHIRAIDLCAFDGTRATINVRCSAGTYIR
TLAEDIGRVLGCGAHLTALARTASGGFQLDQAVSLALLENSDMAARDQLLLPVDSLVAYL
PRIELNGAESAALLKGQRQTLAACTQLAGLVRAYDCQQRFFGLVELHANGLAIARRLMNS
NLSPMQNPVQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttcaaacgcatcaaacgcgccgtgaacggcgtattgctactcgacaagcctgcc
ggcatcacttccaatgccgctctgcaaatcgccaaacgcctgtttcaggccgaaaaggcc
ggccacaccggcaccctcgatccgtttgcacacggcctgttacccctgtgcctgggcgag
gccaccaaattttcccaatatttactggatgccgataaagcctatcgtgccgtgatgcgg
ctgggtgtcaccacgacgaccggcgatcctgaaggcgaagtgctggacacgcgcccggta
aacgtaacacccgctgatctgaatgctgcaatcgcccggtttatcggcaccaccgagcaa
accccgcccatgtattccgccctcaagcaccagggcaggccgctgtatgaatacgcgcgt
gcgggtatcgaaattgcgcgcaaatcacgccacatccacatccgcgccattgatctgtgc
gcatttgacggcacacgggcaaccatcaacgtacgctgcagtgccggcacctacatccgc
acgctggctgaagacattggcagggtgttgggctgtggcgcgcacctgactgcactggcc
cgtacagccagtggcggtttccagctggatcaggcggtcagcctggcgctattggaaaat
agcgacatggctgcgcgcgaccagttgctgctgcctgtcgacagcctggttgcctatctg
ccgcgtattgaactcaatggcgctgaatctgcagccttactcaagggccagcgccagacc
ctcgctgcctgcacgcagctggccgggctggtgcgcgcatacgactgccagcagcgcttt
ttcgggctggtggaactacacgccaatggtctcgcaattgcgcgcagattgatgaatagc
aacttgtcgccgatgcagaatccagtgcaatga
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