Sulfuriferula plumbiphila: SFPGR_27050
Help
Entry
SFPGR_27050 CDS
T06621
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
splb02048
]
SFPGR_27050
Enzymes [BR:
splb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
SFPGR_27050
Prokaryotic defense system [BR:
splb02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
SFPGR_27050
Subtype I-B factors
SFPGR_27050
Subtype I-C factors
SFPGR_27050
Subtype I-D factors
SFPGR_27050
Type II CRISPR-Cas system
Subtype II-B factors
SFPGR_27050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BBP05283
LinkDB
All DBs
Position
2642113..2642739
Genome browser
AA seq
208 aa
AA seq
DB search
MANSADEIVALSALQHWIYCPRQCGLIHLEQAFEDNVHTARGQAVHHLVDTPGYEIKSGV
RVERALPVWCDRLNLIGKADLVEFHPDDSVYPVEFKHGAKRQKLHDDIQLAAQAICLEEM
LNRPVPKGAIFHATSHRRREVSITPELKQLVEETANAIRAMLASGKLPPPVNDARCRECS
LKEICQPEALAERGRLERLREELFSAAG
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaattctgcagacgaaattgtcgccctctccgccctgcaacactggatctactgc
ccgcgccagtgcgggctgattcatctggaacaggcgttcgaggacaatgtacacacggcg
cgcgggcaggccgtgcaccatcttgttgatacgccgggttatgagatcaaatccggcgtg
cgggtagagcgcgcgttgcccgtgtggtgtgatcggctcaatctgattggcaaggccgat
ctggttgagtttcacccggacgacagtgtgtacccagtcgagttcaagcatggagccaaa
cggcagaagttgcacgacgacatacagctcgccgcgcaagcgatttgtctggaagaaatg
ctgaaccgccccgtgcccaaaggcgcgatttttcacgctaccagccaccggcggcgggag
gtgtccatcacaccggaactcaagcaactggtggaggaaaccgccaacgccattcgcgcc
atgctggcctcgggcaagcttccgccgccggtgaacgatgcccgctgccgggagtgttcg
ctgaaagagatttgccagcctgaggcgctggcggaacggggcagattggagcgcttgcgt
gaggaattgttcagtgctgcgggataa
DBGET
integrated database retrieval system
