Sulfuriferula plumbiphila: SFPGR_28430
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Entry
SFPGR_28430 CDS
T06621
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
splb
Sulfuriferula plumbiphila
Pathway
splb02020
Two-component system
splb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SFPGR_28430
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SFPGR_28430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
splb03021
]
SFPGR_28430
Transcription machinery [BR:
splb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SFPGR_28430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
GIY_YIG_2
GIY-YIG
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
BBP05421
LinkDB
All DBs
Position
2772164..2773402
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AA seq
412 aa
AA seq
DB search
MQHHNNKIDAALLGKIVLARFLELPLRAVDRLAAQVESSAGFTALRPWVSVGRLEGARVA
HDAADTPQTRASPILGEVLEADRGLMFLYRRDSFAREYRFDEEGVNCLMVRAGAPAALAR
TLRRLRLINTRNRLTHALMQAVLAAQAAYLRSGQGLALLPLTQATISARLRSESNLSVVA
DAGRISRLVRGLTIMLPNGKVVPLNTLFPKPRQVHCHFVDHMIKEEKTWMAKGLLREPLT
DEAIAAILEREHGIRLSRRTVANIRHDLAIPDYKRRSQGTDYLAATEGFSALLPLTAQAL
RTTVPAHPGVYEIRTVCASSVGGEKEACPGKSVPPVPHGVVYIGSAGDLRKRLGDHLRGS
SANALLYRHVAGGAAQVRFRLISADWRVVERELYQVFCETFGVSPPCNRMSP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaccataacaataagattgatgccgccctgctcggtaaaatcgtgctcgcccgc
tttctggagttgccgctgcgggcggtagaccgtctcgcggcccaggtggagtcctccgcc
ggctttaccgccctgcgcccctgggtgagcgtgggtcgattggaaggcgcgcgggtggcg
catgatgcggccgacaccccccaaacccgggcatccccgatcctgggagaagttctcgag
gcggaccggggcctgatgttcctctaccgccgcgacagcttcgcgcgggaataccggttc
gatgaggagggggtgaactgcctgatggtgcgcgcgggcgctcccgcagcgctggcaaga
acgttgcgcaggttgcgcctcatcaatacccggaaccgcctcacccacgcgctgatgcag
gcggtgctggcagcgcaggcggcgtatctgcgctccggacagggcttggcgctccttccc
ttgacccaggcgaccatttccgcccggctgcggtcggagtcgaatctttccgtggtggcg
gatgcgggccggatttcccggctggtgcgcggactgacgatcatgctgccaaacggcaag
gtggtgccgttaaacaccctgttcccgaagccacggcaggtgcattgccatttcgtggat
catatgataaaagaagaaaaaacatggatggccaaagggttattgcgggaaccgctgacg
gacgaggccatcgccgccatccttgagcgggaacatggcatccgcttgtcgcggcgcacg
gtggcaaacatccggcatgacctggcgattcccgattacaagaggcgcagccagggcacg
gattatctggccgctacggagggcttctccgccctgctgccgctcaccgctcaggcgctg
cgcacaacggttccggcccatccgggcgtgtatgagatccggacggtttgcgcttcctcc
gtcgggggagaaaaggaagcctgcccagggaaaagtgtgccgccagtgccgcacggcgtg
gtctacatcggctcggccggtgatttgcgcaagcgcctcggcgatcacctgcgcggcagc
agcgctaatgcgctgctgtatcgccacgtggccggcggcgccgcgcaggtgcggtttcgc
ctgatcagtgcagactggcgcgtggtggagcgggagttgtaccaggtattttgcgagacg
ttcggcgtgtccccgccgtgtaaccgcatgagcccttaa
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