Sulfuriferula plumbiphila: SFPGR_30220
Help
Entry
SFPGR_30220 CDS
T06621
Symbol
uvrD_1
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
splb
Sulfuriferula plumbiphila
Pathway
splb03420
Nucleotide excision repair
splb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFPGR_30220 (uvrD_1)
03430 Mismatch repair
SFPGR_30220 (uvrD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_30220 (uvrD_1)
Enzymes [BR:
splb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFPGR_30220 (uvrD_1)
DNA repair and recombination proteins [BR:
splb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFPGR_30220 (uvrD_1)
MMR (mismatch excision repair)
Other MMR factors
SFPGR_30220 (uvrD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
AAA_22
RskA_C
YjbE
Motif
Other DBs
NCBI-ProteinID:
BBP05600
LinkDB
All DBs
Position
complement(2944163..2946331)
Genome browser
AA seq
722 aa
AA seq
DB search
MTSLLDGLNPEQLAAVTLPGQSALILAGAGSGKTRVLTTRIAWLIQTGQVSPLGILAVTF
TNKAAKEMLTRLTGMLPINTRGMWVGTFHGLSNRLLRTHHREAGLPQLFQILDSADQLSA
VKRLLKALNVDTEKFEPKKVQYFISGNKEAGLRPQQVEVFDPYTRRLVEFYAAYDEQCNR
EGVADFPELLLRSYELLARNDALRAHYQERFRHILVDEFQDTNRLQYRWLKQFAGAQSVL
MAVGDDDQSIYAFRGAHTGNMNEFQRDYAGDNVIKLEQNYRSHGNILDAANALITQNQSR
LGKNLWTAEGKGEPIRVYEAYNDQEEAGFIVEEVKALQREGTALMDMALLYRSNAQSRVL
EHALFSAGVAYRVYGGLRFFERQEIKHALAYLRLLANPDDDGAFSRVVNFPTRGIGARTL
EQLADAAQAGGTSLWQAARAKAPASKDSAKGLPGFVALMQAMQDATQGLPLPEAIEHVLH
MSGLAAHYQAEKEGADRLENLNELINAATVFANDPEAMAELDEAGGPLASFLAHAALEAG
DHQAGAGSDALQLMTVHAAKGLEFHAVFLGGLEEGLFPHEQSMNEQDGIEEERRLMYVAI
TRARRRLYLSHAQSRMLHGQVRYGIPSRFLDELPSALLKLVNARRMATASSAYHGDAAPA
SATRQRNTSPWRIGMNVRHAKFGVGVVVSVEGQGDDTRVQINFGGANGMKWLALEYARLE
PA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacctccctactcgacgggctcaaccccgagcaacttgccgccgtcaccctgccgggc
cagtcggcgctgatcctggccggggccggcagcggcaagacgcgcgtgctcaccacgcgc
atcgcctggctgattcaaaccggacaagtctcgccgctgggcatcctcgcggtgaccttc
accaacaaggcggcgaaggagatgctgacccggttgaccgggatgttgccgatcaacacg
cgcggcatgtgggtgggtacctttcacggcctgtccaaccgcctgctgcgcacccatcac
cgcgaggccgggctgccgcagttgttccagattctggatagcgccgatcagctctccgcc
gtcaaacgcctgctcaaggcgctcaacgtggacaccgagaaattcgagccgaagaaggtg
cagtactttatcagcggcaacaaggaggccggcctgcgtccacagcaggtcgaggtgttc
gacccctacacgcggcgcctggtggagttttacgccgcctacgacgagcagtgcaaccgc
gagggcgtggccgatttcccggaactgctgctgcgttcctacgagttgctggcgcgcaac
gacgcgttgcgcgcgcattatcaggagcgctttcgccatatcctggtggacgagttccag
gacaccaaccgtctgcagtaccgctggctgaaacagttcgccggggcacaatcggtgctg
atggcggtgggtgacgacgaccagtcgatctacgccttccgtggcgcgcataccggtaac
atgaatgaattccagcgcgactacgcaggtgacaacgtcatcaagctggagcagaactac
cgcagtcacggcaacatcctcgatgccgccaacgcgctcatcacacagaaccagtcgcgc
ctgggcaagaatctgtggacggcagaaggcaagggcgaaccgatccgcgtgtacgaggca
tacaatgaccaggaagaagccggcttcatcgtcgaggaagtgaaagcgctgcagcgcgaa
ggcacggcgctgatggacatggcgctgctgtaccgttccaacgcgcaatcgcgcgtgctg
gagcacgccctgttcagcgccggggtggcgtatcgcgtgtacggcgggctgcgctttttc
gagcgccaggagatcaagcacgcgctggcctatttgcgcctgctggccaatccggatgac
gacggcgcgtttagccgtgtggtcaatttccccacccgcggcatcggcgcgcgcacgctg
gaacagttggccgacgccgcccaggccggcgggacgagcctgtggcaggccgcccgcgcc
aaggcccccgccagcaaggacagcgccaaaggcttgcccggtttcgtcgccttgatgcag
gccatgcaggacgccacgcagggcttgccgctgcccgaagccatcgaacatgtattgcat
atgagcggcctggccgcgcattaccaggccgaaaaagagggcgccgaccggctggaaaac
ctgaacgaactgatcaacgccgccaccgtcttcgccaacgacccggaagccatggccgag
ctcgacgaagcgggcgggccgctggccagcttcctcgcccacgccgcgctggaagcgggc
gaccatcaggccggcgcgggcagcgacgcgctgcaactgatgaccgtgcacgccgccaag
gggctggaattccacgccgtgttcctgggcggactggaagagggcctgttcccgcacgaa
caatccatgaacgagcaggacggcatcgaggaagaacgccgcctgatgtacgtcgccatc
acccgcgcgcgccggcggctgtatttaagccatgcgcaaagccgcatgctgcacggccag
gtacgctacggcatcccgtcgcgcttcctcgacgaactgcccagcgccttgctcaaactg
gtcaacgccaggcgcatggccacagcctccagcgcttaccacggtgatgcagcgccggct
tcagccacgcgccagcgcaacacctcgccgtggcgcatcggcatgaacgtgcgccacgcc
aagttcggcgtgggtgtggtggtcagcgtggaagggcagggcgacgacacacgggtgcag
atcaacttcggcggcgcgaacggaatgaagtggctggcgctggagtatgccaggctggaa
ccggcctga
DBGET
integrated database retrieval system
