Sulfuriferula plumbiphila: SFPGR_30360
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Entry
SFPGR_30360 CDS
T06621
Symbol
cafA
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
splb03019
]
SFPGR_30360 (cafA)
03009 Ribosome biogenesis [BR:
splb03009
]
SFPGR_30360 (cafA)
Messenger RNA biogenesis [BR:
splb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SFPGR_30360 (cafA)
Ribosome biogenesis [BR:
splb03009
]
Prokaryotic type
rRNA processing factors
SFPGR_30360 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
BBP05614
LinkDB
All DBs
Position
2958594..2960048
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AA seq
484 aa
AA seq
DB search
MSEEILINVTPQETRVAVMHLGVVQELHIERISQLGLVGNIYFGKVCRVLPGMQSAFIDI
GLERAAFLHIADIWEERHAGGEERPIERILFEGQGVLVQVIKDPIGTKGARLSTQVSFAG
RFLVYLPQETHIGISQKIEDEAERESLRQKLQQLLPEDEHGGFIIRTMAEQAEERELQAD
IGYLRKLWADIQQQARTAPLKSLLYQELNLSLRVLRDFANEETDRILVDSRETYQKMLSF
AESYSGAVVNKLSHYAAERPLFDLYAIEDEIEKALARRVDLKSGGYLIIDQTEALTTVDV
NTGGFVGVRNFDDTIFKTNLEAAQAIARQLRLRNLGGIIIVDFIDMDNRGHRDEVFSEFK
KALARDHTRMTVNDFSPLGLVEMTRKRTRESLAHVLCQPCPTCQGRGEVKTAQTVCYEIL
REIVREARQFNAREFRILASQQVIDLFLDEESQSLAQLGDFIGKPVSLQVESLYTQEQYD
VILI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaattctcatcaacgtcactccccaggagacccgcgtcgcggtgatgcat
ctgggcgtggtgcaggaactccacatcgaacgcatcagccagcttggcctggtgggcaat
atctacttcggcaaggtgtgccgggtattgccggggatgcagtcggcgtttattgacatc
ggcctggagcgcgcggcgtttctgcatatcgccgacatctgggaagaacgccatgccggg
ggcgaggaacgtccgattgaacgcatcctgtttgagggacagggtgtactggtgcaggtc
atcaaggatccaatcggcaccaagggcgcgcggctgtctacccaggtgagttttgccggg
cgttttctggtgtatctcccgcaggaaacgcatatcggcatctcgcaaaaaatcgaggat
gaagccgaacgcgagtcgctgcgccagaaactgcaacagctgttgcccgaggatgaacac
ggcggcttcatcatccgcaccatggcggaacaggctgaagagcgcgaattgcaggcggat
atcgggtacttgcgcaaactgtgggcggatattcagcaacaggccagaaccgcgccgctg
aaatcgctgctgtatcaggaactgaacctgtcgctgcgcgtgctgcgcgatttcgccaac
gaggaaaccgaccgcattctggtggattcgcgtgaaacctaccagaaaatgctgagcttt
gccgagagctacagcggagctgtggtcaacaagctcagccactacgctgccgagcgtccg
ctgtttgacctgtatgccatcgaggatgaaatcgagaaggcgctggcgcggcgcgtggat
ctgaaatccggcggctacctgattatcgaccagaccgaagcactgaccacggtggacgtg
aacaccggcggtttcgtcggcgtccgcaatttcgacgacaccattttcaagaccaacctg
gaggccgcgcaggctattgcgcgtcagttgcggctgcgcaacctgggcggcatcatcatc
gtggactttatcgacatggacaatcgcggtcatcgcgacgaagtgttttccgagtttaaa
aaggcgctggcgcgtgaccatacgcgcatgacggtgaatgatttttccccgctggggctg
gtggagatgacgcgcaagcgtacccgcgaaagcctggcccacgttttgtgccagccctgt
ccgacctgtcagggacggggcgaagtcaaaaccgcgcaaaccgtgtgttatgaaatcctg
cgcgaaatcgtgcgcgaagcgcgccagttcaatgcgcgcgaattcaggatactggcgtca
cagcaagtgattgatctgtttctggatgaagagtcgcagagcctcgcccagctcggcgat
ttcatcggcaaaccggtatcgctacaggtggaaagcctgtatacccaggagcaatacgac
gtgattctgatttag
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