Sulfuriferula plumbiphila: SFPGR_34250
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Entry
SFPGR_34250 CDS
T06621
Symbol
uvrD_2
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
splb
Sulfuriferula plumbiphila
Brite
KEGG Orthology (KO) [BR:
splb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splb03400
]
SFPGR_34250 (uvrD_2)
Enzymes [BR:
splb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SFPGR_34250 (uvrD_2)
DNA repair and recombination proteins [BR:
splb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SFPGR_34250 (uvrD_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
PAS_5
Motif
Other DBs
NCBI-ProteinID:
BBP06003
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All DBs
Position
3376002..3379286
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AA seq
1094 aa
AA seq
DB search
MTPGEFNRTALNPRQAVVVEACAGSGKTWLLVSRMVRLLLDEVAPSEILAITFTRKAARE
MRARLDDWLRFMATAEDDAVRAFLAERALPPETIEALLPRARGLFEAVLNAQPGITISTF
HAWFLTVIERAPLEAGLAGFSLAEQTHALEAAAWDALADDLARAPTAPLALAMQGLLADI
GLYNTRALLSAFLARRGEWWAFTEGQPDRAAYAVAQLEAALPVAPDADVAGALLGDAAWV
ALMWEYLKLLGQHTPTSIKMAQTCELALSANASADDCFDTLCAAILTQHGEIRKTLSYSV
THAKKMGECALLRLLELHQTVGARLMAAQAARQTQRVYQFNRQALRLGDALLEHYQALKH
ARRVLDFADVEWQVARLLSDSDQAEYLQYKLDARYRHILLDEFQDTNPLQWRVLQSWFDT
AEQAGRMPTVFLVGDPKQSIYRFRGAEAQLFDLAGNYLTGRGAAYLTQHTTRRSAPPVVQ
AVNQTFAAVKNEYALFRPHAAHDAQRAGRVEVLALAQAPEQAVIEHGYRNPLTTPYSDAD
TGVRELEAQQLARRLNQIIGHWLIDDETTGARRAEYRDVMILVRSRTHLPVYERALKAAR
IPFATTRRGGLLDALEVGDLLSLLAFLTTPDADLHLARVLRAPLFDCADTDLLMLAGAEG
DTWRQRLRTLVHNGHASPALQRAATLLTDWHTRAGRLPVHDLLDNIYFTGEVQARYAAAA
PTALIPGIHANLDALMELALTIEGGRYPSLPRFLHEIDLLQQTGNDASPDEGKTAQLDNA
VTLHTIHGAKGLEAPIVWLLDAGARKARTDAYTVLTDWPPGAARPAHFSVYGDKTLRASF
QADFFDAEARHAQRENFNLLYVAMTRARQALIVSGASSKSQNDNWHGQILAALRTDADAA
SVTFGADLDAPMPASTPVVPAPATLAALSAGLNQPQPTGRRIAPVGSSEISYGIVLHAIL
ERITPPARAPAAMALKTELGNPAEFDSAWQHAQRLLGTPLLARFFDPGQYCFAHNELTYL
DAHGESRRIDRVVGLADAVWVLDYKSGSDASAAQLATRHRAQLEDYRTAIRHLHPGQPVR
CAVIAADGRMIEIE
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcctggcgaattcaatcggactgcgctcaacccgagacaggccgtcgtcgtcgaa
gcgtgcgccggcagtggcaagacctggctgctggtgtcgcgcatggtgcggctgttgctg
gacgaggtagcgccgtcggaaattctggcgattacctttacacgcaaggcggcacgcgag
atgcgtgcgcgcctggatgactggctgcgtttcatggcgacggctgaagacgacgcggtg
cgcgcttttctggccgagcgtgcgctgccgccggagacaattgaagccttgctgccacgt
gcgcgcggcctgttcgaagcagtcctcaacgcacagccgggcatcaccatcagcactttc
cacgcctggttcctgacggtgatcgagcgtgccccgctggaggccgggctggcaggcttc
tccctggccgagcagacgcatgcgctggaagccgcggcctgggatgcgctggccgatgat
ctggcgcgcgcgccgaccgcaccgctggcgctggccatgcaaggcctgctggccgatatc
ggcctgtacaacacccgcgcactattgtcggcgttcctggcccggcgcggcgagtggtgg
gcgtttacggaagggcagccagaccgcgcggcctacgccgtcgcgcagctggaggcggcc
ctgccggtggcgcccgacgccgatgtggcgggcgcgctgctgggtgacgcggcttgggta
gcgttgatgtgggaatatctcaaattactcggccaacacaccccaaccagcatcaaaatg
gcgcaaacctgcgagctcgctttgtcagccaacgccagcgccgacgactgttttgataca
ttgtgtgcagcgatactgacgcaacatggcgagattagaaaaacgctcagctatagcgtc
acgcacgctaaaaaaatgggtgagtgcgcattattacggctgctggaactgcaccaaacc
gtcggcgcacgcctgatggctgcccaggccgcgcgtcagacgcaacgcgtgtaccagttc
aaccgccaggcattgcgcctcggtgacgcgctgctggaacattaccaggcactgaagcac
gcgcgccgggtactggattttgccgatgtggaatggcaagtcgcccgactattgagcgat
tcggaccaggccgaatacctgcaatacaagctcgacgcgcgttaccggcacattttgctg
gacgagttccaggacaccaatccgctgcaatggcgcgtgctgcagagctggtttgatacc
gcagaacaggccgggcggatgcccaccgtattcctggtgggcgaccccaagcagtcgatt
taccgttttcgcggcgccgaggcgcagctgtttgacctggccggcaattacttgaccggg
cgcggcgcggcctacctcacccagcacaccacgcgccgcagtgcgccgccagtagtgcag
gcggtgaaccagacttttgccgcggtgaaaaatgaatacgccctgttcagacctcacgct
gcgcacgatgcgcagcgcgccggccgggtcgaagtgttggcgctggcgcaggcgccggag
caggccgttatcgagcatggctaccgcaatccgctcaccacgccatacagcgatgccgac
accggggtgcgtgaactggaagcgcagcaactggcgcgacgcctgaaccagatcatcggc
cattggctgattgacgacgaaacaaccggcgcgcgccgtgccgaataccgcgatgtcatg
atcctggtgcgcagccgcacccatctgccggtgtatgagcgcgcgctcaaggcggcacgc
attccgttcgccaccacgcgccgcggcgggctgctggatgcgctggaagtgggcgattta
ttgagcctgctggcgttcttgaccacccctgacgccgacctgcacctggcgcgcgtgctg
cgcgcaccgctgttcgattgcgctgataccgacttgctgatgctggcaggcgctgagggc
gacacctggcggcagcgcctgcgcaccctggtacacaacgggcacgccagcccggcattg
cagcgtgccgccacactgttgaccgattggcacacccgggccgggcgcctgccggtgcac
gatttgctcgacaatatttactttaccggcgaggtgcaggcacgctatgccgccgccgcg
ccaaccgcgctgatccccggcatccatgccaatctggacgcgctgatggaactggcgctg
actatcgaaggggggcgttacccaagcctgccgcgctttttgcacgagattgatctgctg
cagcaaaccggcaacgatgccagtccggacgaaggcaaaaccgcgcagctggacaatgcc
gtcaccctgcacaccatccacggcgccaaagggctggaagcgccaatcgtctggctgctc
gacgccggtgcgcgcaaagccagaaccgatgcctataccgtgctcaccgactggccaccg
ggcgcggcgcggcctgcacatttttcggtgtatggtgataaaaccctgcgcgcctcgttc
caggccgattttttcgacgccgaagcgcgccacgcccagcgcgaaaatttcaatctgctg
tatgtcgcgatgacccgcgcgcgccaggcgctcatcgtcagcggcgcgtccagcaagtca
caaaacgacaactggcatggccagattctggctgcgctgcgcaccgatgccgacgccgca
agcgtcacgttcggcgccgatctcgacgctccgatgcctgcgtcaacgccagtcgtgccg
gcgcccgccacgcttgccgccttgtccgccggcctcaatcagccacagcccaccgggcgc
cgcatcgcgccggtgggcagcagtgagatcagctacggcatcgtgctgcacgccattctg
gaacgcatcacccctcccgcccgcgcacccgctgctatggccctgaaaaccgaactgggc
aacccggcagaattcgacagtgcctggcaacacgcccagcggctgcttggcacgccgctg
ctggcgcgctttttcgaccccggccaatactgctttgcacataatgaactgacgtatctc
gacgcccatggcgagtcgcggcgtatcgaccgtgtggtgggcttggcagacgcagtctgg
gtgctcgattacaaatccggcagcgacgccagcgctgcacaactcgccacccgtcaccgt
gcccagctggaggattaccgtaccgcgatccgccatcttcaccccggccagcccgtgcgc
tgcgcggtgattgccgcagatggacggatgatcgagattgaatag
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